| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3277 |
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| Symbol | |
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| ID | 3911078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3749252 |
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| End bp | 3751651 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637885179 |
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| Product | RNA binding S1 |
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| Protein accession | YP_486884 |
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| Protein GI | 86750388 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCATCGA TTCGCCGCTC AGCCGGCGCT TCATCGACAC ACCGTGCCCA TTGTTTCGAG
AGACCTCCAG TGCCGAAAAT CGCGTCCATC ATCGCCGCCG AACTCGCCGT CCGTGAAGAA
CAGGTCCAGG CCGCCATCGA CCTGCTCGAC GGCGGGTCGA CCGTTCCGTT CATCGCGCGC
TATCGCAAGG AAGCGACCGG GATGCTGGAC GACGTGCAGT TGCGCGCGCT GGAAGAGCGG
CTCGGCTATC TGCGCGAGAT GGACGCGCGC CGGATCGCGA TCATCGACAG CATCAAGCAG
CAGGGCAAGC TGACGCCCGA GATCGAGAAG GCGCTGCTCG CGGCCGACAC CAAGGCCCGG
CTCGAGGACA TCTATCTGCC GTTCAAGGAA AAGCGCCGGA CCAAGGCGCA GATTGCGCGC
GAGGCCGGGC TCGAGCCGCT GGCCGAGATG CTGCTGACGA ATCCCGACAA GCATCCCGAG
ACCGAGGCGG CGGCCTTCGT GAAGACCGAC GGCGAGCATC CGGTCGCCGA CGTCAAGGCG
GCGCTGGAAG GCGCGCGCGC CATTCTGGTC GAACGCTTCT CCGAACACGC CGACCTCACC
GGCAGCCTGC GCGAAGCGAT CTGGAGCCGC GGCCAGCTCA AGGCGAGCGT TCGCACCGGC
AAGAAAACCG AAGGCGCGAA ATTCGCCGAC TATTTCGACT TTTCCGAGCC TTACCAGAAG
CTGCCGTCGC ATCGCATTCT CGCGTTGCTA CGTGGCGAGA AAGAGGAAAT CCTGACGCTT
GATTTCGGCG ACGGCGAGGA TCCCGACTCC AAGGAGCCGA CGCAATACGA AAACCGCATC
GCGGCGACCT TCGGCATCGC GCGCAAGGGA CGCCCCGGCG ACGCCTTCCT GTCGGATTGC
GTGCGCTGGG CCTGGCGCAC CCGGATCAAG ACCGGGCTCG CGCTCGATAC ACGGATGCGC
CTCTGGCAGC AGGCCGAGAA GGAAGCGGTG CGCGTGTTCG CCGCCAATCT GCGCGACCTG
CTGCTCGCCG CGCCCGCCGG AGGCCGCGCG ACGCTCGGCC TCGATCCCGG CTTCCGCACC
GGCGTCAAGG TCGCGGTGAT CGACCAGACC GGCAAGTTCG TCGACCACAC CACGATCTAT
CCGCACGAGC CGGCGCGGAA GTGGAACGAG AGCATGCTCG AGCTGGCGCA GCTCTGCATC
AAGCATCGCA TCGAGCTGGT CGCGATCGGC AACGGTACCG CGTCGCGCGA AACCGAAAAG
CTCGTCACCG ACCTGATGAA GCTGAAGCCC GAGCTGAAAC TCACCAAGGC GATCGTCTCC
GAGGCCGGCG CCTCGGTGTA TTCGGCCTCC GAATTCGCCT CCAAGGAATT CCCGGATCTC
GACGTCTCGA TCCGCGGCGC GGTCTCGATC GCGCGGCGGC TGCAGGACCC GCTCGGCGAA
CTGGTGAAGG TGCCGCCGCA ATCGATCGGC GTCGGCCAGT ATCAGCACGA CCTCAACCAG
CATGTGCTGT CGCGCGCGCT CGACGCCACC GTCGAGGATT GCGTCAACGC CGTCGGCGTC
GATCTCAACA CCGCATCGGC GCCGCTGCTG GAGCGCGTCT CCGGCATCGG CGAAACGCTG
GCGGCGAACA TCGTCGCCCA CCGCGACGGC AACGGCCCCT TCCCGAGCCG CGCCAAGCTC
AAGGAAGTGC CGCGGCTCGG CCCCAAGGCG TTCGAGCAAT GCGCCGGCTT CCTGCGGATT
CGCGACGGCG AGAATCCGCT CGACGCCTCC GGCGTGCATC CGGAAGCCTA CCCGCTGGTG
AAGAAGATTC TGGCGGCGAC CAAGAGCGAC ATCAAGGCGA TCATCGGCCA GACCAAGACG
CTGCAGTCGC TGCAGCCCGC GTCCTTCGCG GACGACAAAT TCGGCATCCC CACGGTGACC
GACATCCTGA AGGAATTGGA GAAGCCCGGC CGCGATCCGC GGCCGGAATT CAAGACCGCG
ACGTTCCAGG AGGGCGTCGA GAAGATCACC GACCTCAAGC CCGGCATGAT CCTCGAGGCG
ACGGTGACCA ACGTCGCCGC GTTCGGTGCC TTCGCCGACA TCGGCGTGCA TCAGGACGGG
CTGATCCACA TCTCGGCGAT GTCGGAACGG CGGATCAACG ACCCGCGCGA AGTCGTCAAG
CCGGGCCAGG TGGTGAAGGT GAAGGTGCTC GAGGTCGACG TGCCGCGCAA CCGGATCGGG
CTGACGCTGC GGCTGTCGGA TCCCATTCCG GCGCCCGGCG AGCGACGCAA GGACGGCGGC
GGCAACGCCA AGCTGGTCGA TCGCTATCGC CCCAAGCCCG AGCCGAAGAG CACCGGCGGC
GGCGCCTTCG CGGCCGCGCT GGCAAAGGCG GCCGAGAACA GCAAGGGCCG CTCGAAGTAA
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| Protein sequence | MPSIRRSAGA SSTHRAHCFE RPPVPKIASI IAAELAVREE QVQAAIDLLD GGSTVPFIAR
YRKEATGMLD DVQLRALEER LGYLREMDAR RIAIIDSIKQ QGKLTPEIEK ALLAADTKAR
LEDIYLPFKE KRRTKAQIAR EAGLEPLAEM LLTNPDKHPE TEAAAFVKTD GEHPVADVKA
ALEGARAILV ERFSEHADLT GSLREAIWSR GQLKASVRTG KKTEGAKFAD YFDFSEPYQK
LPSHRILALL RGEKEEILTL DFGDGEDPDS KEPTQYENRI AATFGIARKG RPGDAFLSDC
VRWAWRTRIK TGLALDTRMR LWQQAEKEAV RVFAANLRDL LLAAPAGGRA TLGLDPGFRT
GVKVAVIDQT GKFVDHTTIY PHEPARKWNE SMLELAQLCI KHRIELVAIG NGTASRETEK
LVTDLMKLKP ELKLTKAIVS EAGASVYSAS EFASKEFPDL DVSIRGAVSI ARRLQDPLGE
LVKVPPQSIG VGQYQHDLNQ HVLSRALDAT VEDCVNAVGV DLNTASAPLL ERVSGIGETL
AANIVAHRDG NGPFPSRAKL KEVPRLGPKA FEQCAGFLRI RDGENPLDAS GVHPEAYPLV
KKILAATKSD IKAIIGQTKT LQSLQPASFA DDKFGIPTVT DILKELEKPG RDPRPEFKTA
TFQEGVEKIT DLKPGMILEA TVTNVAAFGA FADIGVHQDG LIHISAMSER RINDPREVVK
PGQVVKVKVL EVDVPRNRIG LTLRLSDPIP APGERRKDGG GNAKLVDRYR PKPEPKSTGG
GAFAAALAKA AENSKGRSK
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