Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3165 |
Symbol | |
ID | 3910966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3622922 |
End bp | 3623797 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637885067 |
Product | inner-membrane translocator |
Protein accession | YP_486772 |
Protein GI | 86750276 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATCA ATATCCAGGC CCTGTTGGCG CAGCTTCTGG TCGGGCTGAT CAACGGCTCG TTCTACGCCT TGCTCAGTCT CGGCCTCGCC GTCATCTTCG GGATGCTCAA CATCATCAAC TTCGCCCATG GCGCGCTGTA CATGATGGGC GCGTTCTGCG CCTATTTCCT GCTGAATCTG TTCGGCATCG GCTATTGGTG GGCGCTGATC CTGGCGCCGC TGATCGTCGG CGCGTTCGGG ATGCTGATGG AGCGCACGCT GCTGCAATGG CTGTCCGGGC TCGACCATCT CTACGGCCTG CTCCTGACCT TCGGCGTCGC GCTGATCATC CAGGGGCTGT TCCAGAATTA TTTCGGCTCC TCCGGTCTGC CCTACGCCAT CCCCGACGAA CTCAGGGGAG GCGTCAATCT CGGATTCATG TATCTGCCGA TCTATCGCGG CTGGGTGGTG GCGTTCTCGC TGGTGGTGTG CCTGCTCACC TGGTACCTGA TCGAGCGGAC CCGGCTCGGC GCCAATCTGC GCGCCGCCAC GGAAAATCCG ACGCTGGTGC GCGCGTTCGG CATCAACGTG CCGCGGATGA TCACGCTGAC CTACGGGCTC GGCGTCGGCC TCGCCGCGCT CGCCGGCGTG CTGTCGGCGC CGATCAACCA GGTCCGGCCG CTGATGGGCG CCGATCTGAT CATCGTGGTG TTCGCGGTGG TGGTGATCGG CGGCATGGGC TCGATCATGG GCTCGATCAT CACCGGCTTC GCGCTCGGGG TGATCGAGGG CCTGACCAAA TATTTCTACC CCGAGGCCTC CAACACCGTG GTGTTCGTAC TGATGGTGCT GGTGCTCTTG GTCAAACCCT CGGGACTGAC GGGACGGGCG ACCTGA
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Protein sequence | MSINIQALLA QLLVGLINGS FYALLSLGLA VIFGMLNIIN FAHGALYMMG AFCAYFLLNL FGIGYWWALI LAPLIVGAFG MLMERTLLQW LSGLDHLYGL LLTFGVALII QGLFQNYFGS SGLPYAIPDE LRGGVNLGFM YLPIYRGWVV AFSLVVCLLT WYLIERTRLG ANLRAATENP TLVRAFGINV PRMITLTYGL GVGLAALAGV LSAPINQVRP LMGADLIIVV FAVVVIGGMG SIMGSIITGF ALGVIEGLTK YFYPEASNTV VFVLMVLVLL VKPSGLTGRA T
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