Gene RPB_3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3140 
Symbol 
ID3910941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3590956 
End bp3591846 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content69% 
IMG OID637885042 
Producthypothetical protein 
Protein accessionYP_486747 
Protein GI86750251 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.525721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGAG CTTCGCTTCT CACCGCGGTT CCAACGGCGG CGATCACCGA ACCGTTCGCG 
CTCTATGCGG TCGCGCTCGA TCTCGCCGAG CGCGCTCATC GGCACTACGG CGCGCTCGCC
GCTCGGGTCG ACGAAAACTT CCGGCCGGTG CGCTGCGTGT TCGAGGTGCT GACGGCGCGC
GAACGCGAGC GCGTCGGATC GCTGATCGCG GCTTGTGAGC AGGACTGCGG TCGCGTGCCG
ACGCCGCGCG ATCGGCCCTG GGTGGCGCCG GACCTCGTGC CGGAAAGCGA GCTCTCGGAC
ATCGAACAGT CCAGCCTGTC CACGCCCTAC ACAGCCTGGG CGATTGCGGT GCAACACCGG
CAGCGCGCCT TCGTGTTCTG GACCTACGTG ATCGCGGTGG CGATGGACGC CGAGGTCCGA
TCCGTGGCCG AAGGATTTGC GCGCGAAGCG CTGGCCGACG GCAATCTGCT GCGGCGCGAG
CGGCGAGCGG CCTGGCGGGC GATCCGCGGC CCGCGTCAGC CGGACGGGGA ATTCGCGACT
CGGCCACCGT CGGCTGCGTT GCTCGAGAGC CTGCTGCTCA AGGACATCGC CGCATGGGCG
CAGCATTTGA CGGCCCGGGA GCGCGAGTTC CTGGCGACGC TTGCGCCATC GCCGCTTCCG
CCATCCGGCC AGCCGCACGA GGCGATCGTG GAGGCGTCGC CTCTCGATCA GATCAGCAGC
CGTGCCTTGC ATCGGGCAGA ACAATTGTCG GACCTCTACC TCGACGACGC CGATCGCGCG
ATCGATCAGT CGAGCCTCGA ATTGGCGCAG AAGCTGGCGG CGCAATCGAT CGCGCGTCTG
GCCGGCCTGC GCCGGGTCGC CGCCGCATCG ACGGCCATCG ACCGCAGCTG A
 
Protein sequence
MARASLLTAV PTAAITEPFA LYAVALDLAE RAHRHYGALA ARVDENFRPV RCVFEVLTAR 
ERERVGSLIA ACEQDCGRVP TPRDRPWVAP DLVPESELSD IEQSSLSTPY TAWAIAVQHR
QRAFVFWTYV IAVAMDAEVR SVAEGFAREA LADGNLLRRE RRAAWRAIRG PRQPDGEFAT
RPPSAALLES LLLKDIAAWA QHLTAREREF LATLAPSPLP PSGQPHEAIV EASPLDQISS
RALHRAEQLS DLYLDDADRA IDQSSLELAQ KLAAQSIARL AGLRRVAAAS TAIDRS