| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3076 |
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| Symbol | |
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| ID | 3910877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3507064 |
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| End bp | 3507828 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637884981 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_486686 |
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| Protein GI | 86750190 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.575838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGGG CATTGGTTGG TAAGACGGCG CTGGTCACCG GCTCGAGCCG CGGCATCGGA
CGGGCGATCG CGATCGCTGC TGCGCGCGAA GGCGCGGTTG TCGGCGTGCA CTATGCCGGT
GGCGCCGATG CGGCCGGGGA GACTCTCGAT GCGATCCGGG CCGGGGGCGG CGACGGCTTT
CTGCTTCAGG CCGATCTGTC CGAGCGGGGC GGCCCCGACG CGCTGGCGGC GAAATTTCTC
GACGAAGTCG AACAGCGCAC CGGACAGCGC AGCTTCGACC TATTGGTCAA CAATGCCGGT
TATGGCGGGC GCTACCGGAT CGACCAGGTC GACGACGAGA TCTTTGATCG CATGATCGCG
GTCAATTTCC GGGCGCCGTT CTTTCTGACC CGCGCGCTTC ATCCAGCGAT CAGAGACGGC
GGTCGCATCG TCAACGTCTC GTCAATGGGA ACCCGGGCGG CGTTTCCCGA TATGAGCATT
TACGCGCCGT CGAAGGCGGC ATTGGAGACT CTAAGCGTGG TCCTGGCCAA GCAGCTGGGT
CGCCGCGGCA TCACCGTCAA TGCTGTCTTG CCCGGCGCGA CGGTGACGGA CATGAACCCG
CTCGACAAGG ATCAGGCGCG TGCTGCCGCT GCTACCGAGA CAATTACACT CCAGCGCCTC
GGTCGACCGA ACGACATTGC GGGAGTGGTG CTGATGCTGC TGTCGGATGC TGGTGGATGG
ATCACTGGCC AGCGAATCGA CGCCTCGGGC GGGCAAAGGC TCTGA
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| Protein sequence | MSGALVGKTA LVTGSSRGIG RAIAIAAARE GAVVGVHYAG GADAAGETLD AIRAGGGDGF
LLQADLSERG GPDALAAKFL DEVEQRTGQR SFDLLVNNAG YGGRYRIDQV DDEIFDRMIA
VNFRAPFFLT RALHPAIRDG GRIVNVSSMG TRAAFPDMSI YAPSKAALET LSVVLAKQLG
RRGITVNAVL PGATVTDMNP LDKDQARAAA ATETITLQRL GRPNDIAGVV LMLLSDAGGW
ITGQRIDASG GQRL
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