| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3055 |
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| Symbol | |
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| ID | 3910856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3484682 |
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| End bp | 3485917 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637884962 |
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| Product | restriction modification system DNA specificity subunit |
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| Protein accession | YP_486667 |
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| Protein GI | 86750171 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0732] Restriction endonuclease S subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.363566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGG CAGGGTTTCT GGAGGAGCTG CTGGATGGGG CTGATGTGGA GTGGGAACCA
TTGGGGGAGG TCACTCAACC AACAGCGAAC ATCAAATGGT CACAAGCCGA CGGCGTTTAC
CAATATATTG ATCTCACCTC CGTCGACATC AAAACCAAAC GCGTTACCGA GGCAAGCGAG
ATTACAGCCG AGACCGCGCC AAGCAGAGCG CAGAAGCTCG TTAAAGAAAA TGACGTCATT
TTCGCTACGA CGCGCCCCGC TCAACAACGA TACTGCCTAA TCGACTCCGA ACTGGCCGGA
AACGTCGCCA GCACGGGTTA CTGCGTGCTC AGAGCAAAGA AGGATCAGGT ACTACCTAAG
TGGATTTTGC ACTGGCTTGG CACAACAGAA TTCAAGAATT ACGTCGAGGA GAATCAGAGT
GGGGCTGCAT ACCCAGCGAT ATCAGACGGC AAGGTGAAAG CGTTCAAAAT TCCCATTCCA
TGCCCGGATG ATCCGGAGAA GTCGCTGGCG ATACAGGGGG AGATCGTCCG AATACTGGAC
ACATTCACCG AGCTTACCGC TGAGCTTACC GCGGGGCTTG CCGCCGAGCT TGCCCAGCGC
AAAAAACAAT ACAGCCACTA CCGCGACCAG CTCTTGACCT TCAATGAAGA TGAGGTGGAG
TGGAAGACGC TGGGGGATAT CGCGACTCTA CGCCGAGGGC GAGTTATGTC GAAGGGCTAC
CTGCGAGATA ACGCCGGTGT GTACCCGGTC TACAGCTCCC AAACTGCAAA CAACGGCATG
ATTGGCCAGA TCGACACGTT TGACTTTGAC GGTGAGTACG TCAGTTGGAC CACAGACGGA
GCAAACGCCG GAACTGTATT CTATAGAAAC GAAAAATTCT CGATTACTAA CGTTTGCGGC
GTAATAAAAG AAAATGGAAC GTGCCCGCTG GACCTAAAAT TTTTATCTTT TTGGCTTTCG
ACGGAGGCCA AGAAGCATGT TTACAGTGGA ATGGGCAACC CGAAGCTGAT GAGTCATCAA
GTCGAGAAAA TACCAATCCC GATTCCCTTT CCAGATGACC CTAAAATATC GCTAGAAGCC
CAAAAGCGCG TCGCCGCCAT CCTCGACAAG TTGGATGCGC TGACGACTTC CCTCACTGAG
ATCCTGCCGC GTGAAATCGA GCTGCGTGAA AAGCAGTATG CCTATTACCG CGATCAGCTG
CTGAGCTTCC CCAAGCCGGA CGCGGAGGCT TTCTAA
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| Protein sequence | MSAAGFLEEL LDGADVEWEP LGEVTQPTAN IKWSQADGVY QYIDLTSVDI KTKRVTEASE
ITAETAPSRA QKLVKENDVI FATTRPAQQR YCLIDSELAG NVASTGYCVL RAKKDQVLPK
WILHWLGTTE FKNYVEENQS GAAYPAISDG KVKAFKIPIP CPDDPEKSLA IQGEIVRILD
TFTELTAELT AGLAAELAQR KKQYSHYRDQ LLTFNEDEVE WKTLGDIATL RRGRVMSKGY
LRDNAGVYPV YSSQTANNGM IGQIDTFDFD GEYVSWTTDG ANAGTVFYRN EKFSITNVCG
VIKENGTCPL DLKFLSFWLS TEAKKHVYSG MGNPKLMSHQ VEKIPIPIPF PDDPKISLEA
QKRVAAILDK LDALTTSLTE ILPREIELRE KQYAYYRDQL LSFPKPDAEA F
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