Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2910 |
Symbol | |
ID | 3910706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3317374 |
End bp | 3318879 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637884813 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_486523 |
Protein GI | 86750027 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAC TCGGTTCGAT CACGCCGGCC TTCGTGCGCG CCGAGCTGGT GCCCGAGCGC GCCGCGCCGG TGAAGACCAC CGGCTTCATC GGCGTGATGC GGGGGCGGCT GTTCAATTCG CCCACCAACA TCCTGCTGAC CATCGTCGGC GCGCTGCTGA TGTACTTCAC CGTGGTGCCG ACGGTGAAAT TTCTGCTGGT GGACGCGGTC TGGACCGGCA GCAACCGCAC CGATTGCCTG GCCGAAACGC TGCATCGCGA CGTCGGCGCG TGCTGGCCGT TCGTGCAGGC GAAGGCTTCG CAATTCGTCT ACGGCTTCTA TCCGCAGCCG GAGCGCTGGC GCGTCGACCT GACCTTCGCG CTCGCCGCCT TGCTGCTGCT GCCGCTCTTG ATCCCGCGCG CGCCGGCGAA GACGTTGAAT GCCGGATTGT TCTTCGTCGC TTTCCCGGTG CTTGCGTTCT TTCTGCTGCA TGGCGGCGGG CTGCAGGGCT TCATGGTGAG CTGGACCGCG GACCTGCTGT CCGGCCTGGT CGGCAGTCTC GGCGAAGCGG GCAGCGAGCT CGCGCGCGGC GGCGCGCTCG CGGTCGGCAT CGGCAAGCCG GTGCTGTGGA TCGCCACCGC GCTGAGCTGG CTGATCGCGC CGCTGGTCTG GCTGCGCGAC TGGATCGCGG CCTCCGGCCA GCCGGTGTGG ATCGATCTCG GCCTGACGGC GCTGATCGTC ACCGCGCTGG TCGCCGTTCT GACCGGGCTG CGCAACGGCG GACGACCGCT GCTAATGACG CTCGCGACCT TCATCGGCAT CGCCGTGGTG ATTGCTTGGC TGCGGCTCGA TCGCGGCGGC TTGCCGATCG TCGGCACGCG GCAATGGGGC GGATTGCTGG TGACGCTGGT CGTCTCGGTC ACCGGCATCG TCGCCTCGAT GCCGATCGGC ATCGCGCTGG CGCTCGGCCG GCGCTCGACG ATTCCGCTGA TCCGGCTGTT CTCGGTCGGC TTCATCGAGT TCTGGCGCGG CGTGCCGCTG ATCACCGTGC TGTTCTTCGC GACCTATATG CTGCCGCTGT TCCTGCCCGG CAACTTCACC ATCGACGGGC TGATGCGGGT GCTGATCGGC GTCGCGCTGT TCGCCGGCGC CTACAACGCC GAAGTGGTGC GCGGCGGGCT CAACGCGATT CCGCGCGGCC AGGCCGAAGC CGCCAGCGCG CTCGGGCTGT CCTATGCCAA GACCACGGGT CTGATCGTGC TGCCGCAGGC GCTGCGCCAC GTCATCCCGG GCCTCGTCAA CAGCTTCATC GCGCTGTTCA AGGACACCTC GCTGGTGTCG ATCGTGGCGC TGTTCGATCT CCTGGGCCAG CTCCGCGCCG CCTTCGCCGA TCCGACCTGG TCGACGCCGA CCACGCTGTT CACCGGCTTC GCCTTCACCG GGCTGATCTA CTTCGTGTTC TGCTTCGGCA TGTCGCGCTA TTCGTTGTTC GTCGAACATC GGCTCAATGC CCACCGGCGC ACCTGA
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Protein sequence | MSELGSITPA FVRAELVPER AAPVKTTGFI GVMRGRLFNS PTNILLTIVG ALLMYFTVVP TVKFLLVDAV WTGSNRTDCL AETLHRDVGA CWPFVQAKAS QFVYGFYPQP ERWRVDLTFA LAALLLLPLL IPRAPAKTLN AGLFFVAFPV LAFFLLHGGG LQGFMVSWTA DLLSGLVGSL GEAGSELARG GALAVGIGKP VLWIATALSW LIAPLVWLRD WIAASGQPVW IDLGLTALIV TALVAVLTGL RNGGRPLLMT LATFIGIAVV IAWLRLDRGG LPIVGTRQWG GLLVTLVVSV TGIVASMPIG IALALGRRST IPLIRLFSVG FIEFWRGVPL ITVLFFATYM LPLFLPGNFT IDGLMRVLIG VALFAGAYNA EVVRGGLNAI PRGQAEAASA LGLSYAKTTG LIVLPQALRH VIPGLVNSFI ALFKDTSLVS IVALFDLLGQ LRAAFADPTW STPTTLFTGF AFTGLIYFVF CFGMSRYSLF VEHRLNAHRR T
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