| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2876 |
|---|
| Symbol | |
|---|
| ID | 3910670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 3272113 |
|---|
| End bp | 3274890 |
|---|
| Gene Length | 2778 bp |
|---|
| Protein Length | 925 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637884777 |
|---|
| Product | DNA gyrase subunit A |
|---|
| Protein accession | YP_486489 |
|---|
| Protein GI | 86749993 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
|---|
| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.987294 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCCGACA AAGACGACGA GAAGCCCGGG GAGCCTCAGG CGCCCTCGGA TATTCGCCCC
GTATCCATTC TCGACGAGAT GAAGCGCAGC TATCTCGATT ACGCGATGAG CGTGATCGTG
GCGCGAGCGC TGCCGGATGC GCGCGACGGA TTGAAACCGG TGCATCGCCG GATTCTCTTC
GGCATGTACG AGAACGGATT CGAGTGGAAC AAGCCGTATC GCAAATCGGC GCGCACCGTC
GGCGACGTCA TCGGTAAGTA TCACCCGCAC GGCGACCAGT CGGTGTACGA CGCGATGGTG
CGCATGGCGC AGGACTTTTC CATGCGCGTG CCGCTGATCG ACGGTCAGGG CAATTTCGGC
TCGGTCGACG GCGACGCGCC GGCCGCGATG CGATACACCG AATCGCGCCT GACCAAGATC
GCGCAATTGC TGCTCGACGA TCTCGACAAG GACACCGTCG ACTATCAGGA CAACTACGAC
GGCTCGTTCA ACGAGCCGCA GGTGCTGCCG GCGAAGTTCC CGAACCTGCT GGTCAACGGC
GCCGGCGGCA TCGCCGTCGG CATGGCGACC AACATTCCGC CGCACAATCT CGGCGAGGTG
ATCGACGCCT GTATCGCATT GATCGACGAT CCGGCGCTGT CGATCGACGA TCTGAACGTC
ATCATCCCGG GCCCCGACTT CCCGACCGGC GGCATCATTC TCGGCCGCGC CGGCATTCGT
CTCGCCTACC ACACCGGCCG CGGTTCGATC GTGATGCGCG GCAAGGTCGA GATCGAAACG
GTCCGCAAGG ACCGCGAGGC GATCATCATC TCGGAGATCC CTTACCAGGT GAACAAGGCC
ACCATGGTCG AGCGGATCGC CGATCTGGTG CGCGAGAAGA AGATCGAGGG CATCTCCGAT
CTGCGCGATG AATCCGACCG CGACGGCTTC CGCGTCGTGA TCGAGCTGCG GCGGGACGCG
GTGCCGGACG TGGTGCTGAA CCAGCTCTAC CGCTTCACGC CACTGCAGAC CAATTTCGGC
GCCAACATGG TGGCGCTCGA CGCCGGCCGT CCGCAACTGA TGAACCTCAA GGATCTGCTG
ACGCTGTTCG TCGCGTTCCG CGAGCAGGTG GTCACGCGGC GGACCAAATA TCTGCTGAAC
AAGGCGCGCG ACCGCGCTCA TATTTTGGTC GGCCTCGCCA TCGCGGTGGC GAATATCGAC
GAGATCATTC GCGTCATCCG CAATTCGCCC GATCCGAACA CGGCGCGCGA AACCCTGATG
TCGCGCGACT GGCCGGCGGC CGACGTCGCC GCGATGATCA CGTTGATCGA CGACCCGCGC
CACAAGCTCA ACGAGGACGG CACCGCGCGG CTGTCGTTCG AGCAGGCCAA GGCGATCCTC
GATCTGCGGC TGCAGCGCCT GACGGCGTTG GGTCGCGAGG AAATCGCCGA GGAACTCGAC
AAGCTCGCGC TCGAGATCGC CGACTATCTC GACATCCTGC GTTCGCGGGC GCGGGTGCAG
ACCATCGTCA AGGACGAACT GATCGCGGTG AAGACGGAAT TCGCCACGCC GCGCAAGACC
GTGATCATCG AGCAGGAAGG CGAGGTCGAA GACGAGGACC TGATCCAGCG CGAGGACATG
GTGGTGACGG TGTCGCACGC CGGCTACGTC AAGCGCGTGC CGCTGTCGAC CTATCGGGCG
CAACGCCGCG GCGGCAAGGG CCGCTCCGGC ATGGCGACCC GCGAGGAGGA TTTCGTCTCC
AGGCTGTTCG TCGCCTCGAC GCACACGCCG GTGCTGTTCT TCTCGTCGCG CGGCCAGGTC
TACAAAGAAA AGGTGTGGCG GCTGCCGATC GCGCCGCCGA ACGGCCGCGG CAAGGCGCTG
ATCAACATCC TGCCGCTGGA GCAGGGCGAG CGCATCACCA CGATCATGCC GCTGCCGGAG
GACGAGCAGT CCTGGGCCGC GCTCGACGTG ATGTTCGCGA CCACCGGCGG CAATGTCCGC
CGCAACAAGC TGTCCGACTT CGTCGACGTG CGCCGCTCCG GCATCATCGC GATGAAGCTC
GACGACGGCG AGGCGATCGT CGACGTGCAG ATCTGCACCG AGCGCGACGA CGTGTTGCTG
ACAACTGCCA ATGGTCAGTG CATTCGATTT CCTGTCTCGG ACCAAAGAGA CGGCAAGGAA
TTCGGTGTCC GAGTCTTCCA AGGTCGTTCA TCCATGGGCG TGCGCGGCAT TGCTCTAGCG
CCCGAGGACA AGGTGATCTC GCTTAGCATC CTGCGCCATC TCGACGCCGG ATCCGAGGAG
CGCGCCGCCT ATCTGCGCCG CGCCAATGCG GTGCGTCGCG GCGGCGTCGA GGAGCGGGCG
GCGGTGGAGG ACGAGGCCGC GGGGGTCGAG GGCGAGGACG CCTCGGTCGG CGCGATCGAG
CTCGGCGAGC AGCGCTATGT CGAGATGTCG GCGTCCGAGC AGTTCGTGCT GACGATCTCG
GAGAACGGCT ACGGCAAGCG GACCTCGTCG TTCGAGTACC GCACAACCAA CCGCGGCGGC
AAAGGCATCG TGGCGATGTC GGTCAACAAC CGCAACGGCA AGCTGGTGGC GTCGTTCCCG
GTGGAGGATT CGGACCAGAT CATGCTGGTG ACCGACAACG GCCAGTTGAT CCGCTGCCCG
GTCGAAGGCA TCCGGGTCGC TGGGCGCTCG ACCCAGGGCG TGATCGTGTT CGACACCGCA
GACGACGAGA AGGTGGTGTC GGTCGAGCAC ATTCCCGAGG CGGAAGAGAC CGAGAACGGA
AACGGTAACG GCGGCTGA
|
|---|
| Protein sequence | MSDKDDEKPG EPQAPSDIRP VSILDEMKRS YLDYAMSVIV ARALPDARDG LKPVHRRILF
GMYENGFEWN KPYRKSARTV GDVIGKYHPH GDQSVYDAMV RMAQDFSMRV PLIDGQGNFG
SVDGDAPAAM RYTESRLTKI AQLLLDDLDK DTVDYQDNYD GSFNEPQVLP AKFPNLLVNG
AGGIAVGMAT NIPPHNLGEV IDACIALIDD PALSIDDLNV IIPGPDFPTG GIILGRAGIR
LAYHTGRGSI VMRGKVEIET VRKDREAIII SEIPYQVNKA TMVERIADLV REKKIEGISD
LRDESDRDGF RVVIELRRDA VPDVVLNQLY RFTPLQTNFG ANMVALDAGR PQLMNLKDLL
TLFVAFREQV VTRRTKYLLN KARDRAHILV GLAIAVANID EIIRVIRNSP DPNTARETLM
SRDWPAADVA AMITLIDDPR HKLNEDGTAR LSFEQAKAIL DLRLQRLTAL GREEIAEELD
KLALEIADYL DILRSRARVQ TIVKDELIAV KTEFATPRKT VIIEQEGEVE DEDLIQREDM
VVTVSHAGYV KRVPLSTYRA QRRGGKGRSG MATREEDFVS RLFVASTHTP VLFFSSRGQV
YKEKVWRLPI APPNGRGKAL INILPLEQGE RITTIMPLPE DEQSWAALDV MFATTGGNVR
RNKLSDFVDV RRSGIIAMKL DDGEAIVDVQ ICTERDDVLL TTANGQCIRF PVSDQRDGKE
FGVRVFQGRS SMGVRGIALA PEDKVISLSI LRHLDAGSEE RAAYLRRANA VRRGGVEERA
AVEDEAAGVE GEDASVGAIE LGEQRYVEMS ASEQFVLTIS ENGYGKRTSS FEYRTTNRGG
KGIVAMSVNN RNGKLVASFP VEDSDQIMLV TDNGQLIRCP VEGIRVAGRS TQGVIVFDTA
DDEKVVSVEH IPEAEETENG NGNGG
|
|---|
| |