| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2873 |
|---|
| Symbol | |
|---|
| ID | 3910667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 3270323 |
|---|
| End bp | 3270886 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637884774 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
|---|
| Protein accession | YP_486486 |
|---|
| Protein GI | 86749990 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.245604 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGTT TGATAGGCAT CATCGCCGCG CTGGTGTTCG CTCTGCCCGC GCTGGCGCAG
CCGCTGCCCG CCGGCCTCGA CAAGCAGAAC GCCATCGTCA TCGACAGCAC CAAGGGGCGG
ATCGTGATCC AGCTCCGGCC GGACATCGCG CCGCAGCACG CCGAACGCAT CAAGCAGCTC
GCCCGCGACG GCTTCTACAA CAACGTGCCG TTCCACCGCG TGATGGCCGG CTTCATGGCG
CAGACCGGCG ACGGCGAGAA GTTCAACGGC ACCGGCGGTT CGAAATATCC GAACCTGAAG
CAGGAGTTCT CCAAGGTGCC GTTCAAACGC GGCATCGTCG GCATGGCCCG GCGCGGCGAC
AGCGTCGACA GCGCGAACGC GCAGTTCTTC ATCATGTTCG ACGACGGGCC GAGCCTGAAC
GGGCAGTACA CCGTGATCGG CGAAGTGGTG TCCGGCATGG ATGTCGTCGA CAAGCTGAAG
AAGGCCTCGC CCGGCTCGCC CGGCGGCTCG GTGACCGACC CCGACAAGAT GGTCAAGGTC
CAGGTCGCCG CCGACGTCAA GTAA
|
|---|
| Protein sequence | MIRLIGIIAA LVFALPALAQ PLPAGLDKQN AIVIDSTKGR IVIQLRPDIA PQHAERIKQL
ARDGFYNNVP FHRVMAGFMA QTGDGEKFNG TGGSKYPNLK QEFSKVPFKR GIVGMARRGD
SVDSANAQFF IMFDDGPSLN GQYTVIGEVV SGMDVVDKLK KASPGSPGGS VTDPDKMVKV
QVAADVK
|
|---|
| |