| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2830 |
|---|
| Symbol | |
|---|
| ID | 3910623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 3224509 |
|---|
| End bp | 3224916 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637884730 |
|---|
| Product | cupin region |
|---|
| Protein accession | YP_486443 |
|---|
| Protein GI | 86749947 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.148707 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTT TCGTAGCCGG TTCGCGTCCG ACCCAGCGGG CGCCGAAAGA CTATTTTACC
GGGACGGTCT GGCAGGACCC GATCGTCTCC GCGCCGGCCC CGGCGCGGCT GGCGGCGACC
CGCGTCGCGT TCGAACCGGG GGCGCGAACG GCCTGGCACA CCCATCCGCT CGGCCAGACG
CTGTACGTCG TGACGGGGCT CGGCCGGATC CAGACCGAGG GCGGGCCGGT CCGCGAGATC
AAGGCCGGCG ACGTGGTCTG GATACCGCCC GGTGAGAAGC ACTGGCATGG CGCGTCGCCG
ACCAACGGCA TGACCCATAT CGCCATGCAG GAAGCGCTCG ATGGCAGCTT CGCAACCTGG
ATGGAACCCG TCTCCGATGC CGATTATGCC GTGAATCCAT CTGTTTGA
|
|---|
| Protein sequence | MDIFVAGSRP TQRAPKDYFT GTVWQDPIVS APAPARLAAT RVAFEPGART AWHTHPLGQT
LYVVTGLGRI QTEGGPVREI KAGDVVWIPP GEKHWHGASP TNGMTHIAMQ EALDGSFATW
MEPVSDADYA VNPSV
|
|---|
| |