| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2821 |
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| Symbol | |
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| ID | 3910614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3215528 |
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| End bp | 3216679 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637884721 |
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| Product | peptidase M50, putative membrane-associated zinc metallopeptidase |
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| Protein accession | YP_486434 |
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| Protein GI | 86749938 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.370481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.544468 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGATC TTTTTATGAA CGGGTTCAAC ACGTTGAGCC ACGGAATCGT GGGTTACGTG
GTGCCGTTTC TGTTCGTGCT GACGATCGTG GTGTTCTTCC ACGAACTCGG CCATTTTCTG
GTCGCACGCT GGAACGGTGT CAGGGTGTTG ACCTTCTCGT TGGGCTTCGG CCCGGAGATC
GCCGGCTTTA ACGATCGCCA TGGAACCCGC TGGAAGCTCT CGGCGATCCC GCTCGGCGGC
TACGTCAAGT TCTTCGGTGA CGAGAGCGAG GCGAGCACGC CGTCGACCGA TTCACTGTCG
AAGATGAGCG CGGAGGAGCG CTCGGTCAGC TTTCACCATA AGAAAGTCGG CCCGCGTGCG
GCGATCGTCG TCGCCGGTCC GTTGGCCAAT TTCATTCTCG CGATCGTGCT GTTCACCTTT
CTGTTCTCGG TGTTCGGCGT TCCGAGCACC TCGGCCCGGG TCGACAACAT TCAGCCGGGC
AGCGCCGCCG AAGCGGGCGG CTTCAAGCCG GGCGACATCG TCGTCGCCAT CGACGGAAGC
CCGATTCAGA ACTTTCAGGA GATGCAGCGC ACCGTCAGCC GGGAGGCTGG ACGGCAGTTG
GACTTCACGG TCAAGCGTGG AACTGAGACC GTCGATCTGA AGGCGACGCC GGAACTTCGC
GAGATCAAGG ATCGGTTCGG CAATGCCCAG CGCCTCGGCA TTCTGGGAAT CAGCCGCTCC
ACTTCCGCCA ACGAGGTCAC CACGGAGCGC TTGAATCCGG CCGCCGCGGC CTGGATGGGG
GTCAAGGAGA CCTGGTTCGT CGTCGATCGG ACCTTCGCCT ATATCGGCGG CCTGTTCGCC
GGCCGGGAAG CTGCCGACCA GCTCGGCGGT CCGTTGCGAA TCGCACAGAT CTCTGGACAG
GTCGCGACCA TCGGCTTTAC CCCGCTGCTC CATCTGGCGG CGGTGCTGTC GATTTCGATC
GGGTTGCTCA ACCTGTTTCC GGTCCCGCTG CTCGATGGTG GGCACCTGAT GTTCTATGCC
ATCGAAGCCG TCCGCGGGCG TCCGCTGTCG GAGCGGGCGC AGGAAATGGG CTTTCGGATC
GGGCTCGGAC TGGTGCTGAT GTTGATGGTT TTCGCGACAT ACAACGATAT CCTGCACTTG
GCTTCGTCGT AA
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| Protein sequence | MADLFMNGFN TLSHGIVGYV VPFLFVLTIV VFFHELGHFL VARWNGVRVL TFSLGFGPEI
AGFNDRHGTR WKLSAIPLGG YVKFFGDESE ASTPSTDSLS KMSAEERSVS FHHKKVGPRA
AIVVAGPLAN FILAIVLFTF LFSVFGVPST SARVDNIQPG SAAEAGGFKP GDIVVAIDGS
PIQNFQEMQR TVSREAGRQL DFTVKRGTET VDLKATPELR EIKDRFGNAQ RLGILGISRS
TSANEVTTER LNPAAAAWMG VKETWFVVDR TFAYIGGLFA GREAADQLGG PLRIAQISGQ
VATIGFTPLL HLAAVLSISI GLLNLFPVPL LDGGHLMFYA IEAVRGRPLS ERAQEMGFRI
GLGLVLMLMV FATYNDILHL ASS
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