| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2790 |
|---|
| Symbol | pyrG |
|---|
| ID | 3910583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 3179030 |
|---|
| End bp | 3180661 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637884690 |
|---|
| Product | CTP synthetase |
|---|
| Protein accession | YP_486403 |
|---|
| Protein GI | 86749907 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0504] CTP synthase (UTP-ammonia lyase) |
|---|
| TIGRFAM ID | [TIGR00337] CTP synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.015258 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGGT ATATTTTCAT CACCGGCGGC GTGGTCTCCT CGCTCGGCAA GGGTCTCGCA
TCAGCGGCAC TCGGCGCGCT GCTGCAGGCG CGAGGCTACA AGGTCCGCCT TCGCAAGCTC
GATCCCTATC TCAATCTCGA TCCCGGGACG ATGTCGCCGT ATCAGCACGG CGAAGTGTTC
GTGACCGACG ACGGCGCCGA GACCGATCTC GATCTCGGCC ATTACGAACG GTTCACCGGG
CGGCCCGCCA CCCGGCAGGA CAACATCACC ACCGGTCGGA TCTATCAGGA CATCCTGACC
AAGGAACGCC GCGGCGACTA TCTCGGTGCC ACCATCCAGG TGGTCCCGCA CGTCACCAAC
GCGATCAAGG ACTTCATCGT CGATTCCAAC GACGGCTACG ATTTCGTGCT GGTCGAGATC
GGCGGCACCG TCGGCGACAT CGAAGGCCTG CCGTTCTTCG AGGCGATCCG ACAGATCAAG
AACGATCTGC CGCGCGGCGA CGTGATCTAC ATTCACCTGA CGCTGCTGCC CTACATCCCG
AGCGCCGGCG AATTGAAGAC CAAGCCGACC CAGCATTCGG TCAAGGAGCT GCGTTCGATC
GGCATCCAGC CCGACATCCT GCTGTGCCGC ACCGACCGTC CGATCCCGAA AGAGGAACGG
CGCAAGCTCG GGCTGTTCTG CAACGTCCGC GAAAGCGCGG TGATCGAGGC GCGCGACGCC
GACAGCATTT ATGCTGTGCC GGAGGCGTAT CACGCCGCAG GCCTCGACGA CGAAGTGCTG
GCGGCATTTG CGATTGCGGC CGAACAGCCG CCGGCGCTGG AGCGCTGGCA TCAGATCAAC
GAGCGTATCC GCAATCCTGA AGGCGCGGTG ACGATCGCCA TCGTCGGCAA ATACACCGGG
ATGAAGGACG CCTACAAGTC GCTGATCGAG GCGCTGTCGC ACGGCGGCAT CGCCAACAAG
GTCCAGGTCA AGCTCGACTG GATCGAGAGC GAAGTGTTCG AGAACGAGGA CCCGGCGCCG
TTCCTCGAGC ACGTCAACGG AATCCTGGTG CCCGGCGGCT TCGGTCAGCG CGGCGCCGAG
GGCAAGATCA AGGCGGCGCA GTTCGCCCGC GAACGCGACG TGCCGTATTT CGGCATCTGC
TTCGGCATGC AGATGGCGGT GATCGAGGCG GCGCGCAATC TCGCCGGCAT CGAGCAAGCC
AACTCGACCG AATTCGGCCC GACGGCGGAG CCGCTGGTCG GCCTGATGAC GGAATGGCTG
CGCGGCAACG AGTTGGAGCG GCGCTCCAAC GCCGGCGACC TCGGCGGGAC GATGCGGCTC
GGCGCCTATC CGGCGGCGCT GAAGCGCGGC AGCCGGGTGT CGAAGATCTA CGGCGACGTG
CTGGAGATTT CAGAGCGCCA CCGCCATCGC TACGAGGTCA ACACCGCCTA CAAGGACCGG
CTCGAACAGC ACGGCCTGCG CTTCTCCGGC ATGTCACCGG ACGGTGTGCT GCCGGAGATC
GTCGAATACG AGGATCATCC GTGGTTCATC GGGGTGCAGT TCCACCCCGA ACTGAAATCA
CGCCCGTTCG AGCCGCATCC GCTGTTCTCG TCCTTCATCG AAGCGGCGCT GGTGCGCAGC
CGGCTGGTGT AG
|
|---|
| Protein sequence | MARYIFITGG VVSSLGKGLA SAALGALLQA RGYKVRLRKL DPYLNLDPGT MSPYQHGEVF
VTDDGAETDL DLGHYERFTG RPATRQDNIT TGRIYQDILT KERRGDYLGA TIQVVPHVTN
AIKDFIVDSN DGYDFVLVEI GGTVGDIEGL PFFEAIRQIK NDLPRGDVIY IHLTLLPYIP
SAGELKTKPT QHSVKELRSI GIQPDILLCR TDRPIPKEER RKLGLFCNVR ESAVIEARDA
DSIYAVPEAY HAAGLDDEVL AAFAIAAEQP PALERWHQIN ERIRNPEGAV TIAIVGKYTG
MKDAYKSLIE ALSHGGIANK VQVKLDWIES EVFENEDPAP FLEHVNGILV PGGFGQRGAE
GKIKAAQFAR ERDVPYFGIC FGMQMAVIEA ARNLAGIEQA NSTEFGPTAE PLVGLMTEWL
RGNELERRSN AGDLGGTMRL GAYPAALKRG SRVSKIYGDV LEISERHRHR YEVNTAYKDR
LEQHGLRFSG MSPDGVLPEI VEYEDHPWFI GVQFHPELKS RPFEPHPLFS SFIEAALVRS
RLV
|
|---|
| |