Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2679 |
Symbol | |
ID | 3910472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3061096 |
End bp | 3061836 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637884579 |
Product | thymidylate kinase |
Protein accession | YP_486292 |
Protein GI | 86749796 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.18582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.346659 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGAAC AGACAACCCA AACTGCCTCA GCTTGCGGCC ATTTCATCAC TTTCGAAGGG GGCGAGGGGG CCGGCAAATC AACCCAGATC AGGCTGCTGG CGCAGCGGCT GGAAAAGGCC GGGCTGGAGA CCCTGGTGAC GCGCGAGCCG GGCGGCTCGC CGGGTGCAGA GATCATCCGG CATCTGTTGC TGGCCGGCGT CGGCCGGGCG ATCGGCGGTG CTGAGGCTGA GGCGCTGCTG TTCGCCGCGG CCCGCGACGA CCATGTCCGC ACATTGATCC AGCCCGCATT GGATCGCGGC GTCTGGGTGC TGTGCGACCG GTTCTATGAT TCGACCAGGG TCTACCAGGG TCGGCTCGGC GACGTCAGCC CTGGGATGCT GAACGCTTTG CAGGACGTCA CCATCGGCAC CATGAAGCCC GACCTCACCG TGATCCTCGA CGTGCCGGTC GAAATCGGGC TGGCGCGCGC CGCAGTGCGT CGCGGCAGCG ATGCGCCCGA CCGATTCGAA TCCGAGAACA TCGATTTTCA TCGCCGGTTG CGCGACGCCT ATCGGCAGAT CGCGCGCGCC GAGCCGGAGC GCTGTGTGCT GGTCGATGCG CATGCCGAAC CGAAGGTCGT GGCCGATCGG ATCTGGCTGA CGGTGCAGGA GCGGCTGCTG CAGTGGCCGC AGGCCAAACC CGCGGTGACG CCGAAGGCGA AAGCTAAGAC GAAAACGAAG ACCAAGGCGC GATCGGCATG A
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Protein sequence | MLEQTTQTAS ACGHFITFEG GEGAGKSTQI RLLAQRLEKA GLETLVTREP GGSPGAEIIR HLLLAGVGRA IGGAEAEALL FAAARDDHVR TLIQPALDRG VWVLCDRFYD STRVYQGRLG DVSPGMLNAL QDVTIGTMKP DLTVILDVPV EIGLARAAVR RGSDAPDRFE SENIDFHRRL RDAYRQIARA EPERCVLVDA HAEPKVVADR IWLTVQERLL QWPQAKPAVT PKAKAKTKTK TKARSA
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