Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2654 |
Symbol | |
ID | 3910447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3034615 |
End bp | 3036888 |
Gene Length | 2274 bp |
Protein Length | 757 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637884554 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_486267 |
Protein GI | 86749771 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0434213 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTC GAACAAGAAA AGCGACGAAG CAGACCCTTC TGCTTTGCAC GGTCAGCCTG CTCGCACTGG CGGCCGATTT TCCGCACGGC GCGCGGGCGC AATCGAATCT GCCGGCGGTC ACCGTCGACG CGCCGCAGCC GCAGCAGCGC GCGCGCAGCG CGCCGACGAC ATCGTCCCGC AGCACGGCGC GCGCGACGCG CCGCGCCAAC CGCGCCGCGA CGACGCCGCC CCAGGCCGCG CCGATGCCGT CGGTCCATGA GCGCATCTAT GCCGGCACCA ACAGCTATGT CGCCGGACAA TCGAGCGCGG CCTCGAAGAC CGACACGCCG CTGATCGACA CGCCGCGTTC GGTCAGCGTG ATCGATCGCA AGGAACTCGA CGATCGAGGC GTCACCAGCA TCCCGGAAGC GGTGCGCTAT TCGGCGGGCG TCACCACCGG CGGCTACGGC TACGATCCGC GCTTCGACCA GATCTACATC CGCGGCTTCT CGACCACGAC GCTCGGCGAT TTCCGTGACG GGCTGAAGCA GTTTCCGGCC GGCTTCTCGA CCTTCCGCAC CGAGCCGTAT CAGCTCGACC GCGTCGAGAT CATCAAGGGG CCGGCCGCGG TGCTGTACGG CCAATCGGTG CCGGGCGGAC TGGTCGATCG GCGGTCGAAA TTTCCGGTGG AAAACCAGGT CAACGAGATC GCGATTCAGG CCGGCACGTT CGATCGCTTC CAGACCGCCT TCGACATCGG CGGCGCCGCC AGTCCCGACA AGTCGCTGCT GTATCGGCTG GTCGGTGTCG CCCGCAGCGG CGACACCAAT TTCGACGTCG CCGATCAAAG GCTGATGCTG GCGCCGTCGC TGACCTGGCG ACCGACCGCC GACACCACGC TGACGACCTA CGCGCTGGTG CAGAAGGACG AGACCGATTC CAGCGTCGCC GCGCTCAACC GCAACGGCAA ATTGCTGACC GTCAACGGCG AATATCTGCG CGCCAGCGAT CCCAAATACG ACTATCTGAA GCTGCAGCAG GTGCAGACCG GCTACAAGCT CGAGCACCGC TTCGACGACG TCTTCACCTT CCGGCAGCAC ACGCGGTTCT CCAATCTGAA GACGGACTCG CGCTATCTCA GCGGAAGTTT CGCCAATACC ACGACGTCGA TCTACAATCG CGCCGCCTAT GCGGTGGGCG ACGAGCAGAC CAGTTGGCAG ACCGACAACA ATCTGCAGGC GGATTTCGCC ACCGGCCCGG TGGCGCACCG GGTGCTGGCC GGCGTGAACT ACGACCACAA TGTCTGGGAC TTCCAGTTCG GCGGCAGCGG CGTGCAGTCG GCCTACGCGC TCGACATCTC CAATCCAACC TACGGGATCG CCGGCGCGAC GCCGGCCTAC ACCTCCGGTT CGCGCTCGAC CCAGGAGCAG GTGGGCGTCT ATCTGCAGGA TCAGATGCGG CTCGGCGGCT GGCACCTGTC GCTGGCCGGG CGTCACGACT GGGCCGATCA GACCCGGATC AACACCTACA CCAACGCCGT CACCGGTCAG CGCAACGATT CCGCCTTCTC CTACAGCGCC GGGTTGCTGT ACCATTTCGA CAACGGCGTC GCGCCCTATG TCAGCTACGC GACCTCATTC CAGCCGACGA CCTCGATGGC GATCGACGGC AGCGTGCTGG CGCCGTCCGA AGGCGAGCAG TTCGAGGCCG GCGTGAAATA TCAGCCGCGT GCCGACGTGT TGCTGACCGC CTCGGTCTAC GACCTGACGG AGAAGAACGC CGCCAAGCTC GCCGGCTACG TCAACGGCGT CGCCTATTAC GCCTCGGTCG GCGAGATTCA CGTCCAGGGC GTCGAGCTCG AGGCGCGGGC GCGACTGACG CCCGAATTGG AGACGGTGAC GGCCTATACG TTCTCCGATG CCGAGATCAC CAAGACGACC GTCGCCAGCG AGCTGAACAA GGTTCCGGCG GTGACGCCGA AACACACCGC GTCGAGCTGG CTCAACTATT CGTTCCTGAA CGGCCCGCTC GACGGACTAG GGCTGGGTGT CGGCGTCCGC TACATCGATG CCACCTGGAC GTCGAATGCC AACACCGATC GCAACAATGG CTACACGCTG GTCGATCTGG CGATGCGTTA CGATCTCGGC AAGCTGGCGC GGCAGTTCGC CGGGTTCCAA GCCTCGGTCA ACGCCAACAA CATCGCCGAC GAGCAGATCG CGGTGTGCAA CGCCGGCTAT TGCTATCTCA GCCAGGGGCG CACCGTGATC GGCACGCTGC GCTATCGCTG GTAG
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Protein sequence | MKFRTRKATK QTLLLCTVSL LALAADFPHG ARAQSNLPAV TVDAPQPQQR ARSAPTTSSR STARATRRAN RAATTPPQAA PMPSVHERIY AGTNSYVAGQ SSAASKTDTP LIDTPRSVSV IDRKELDDRG VTSIPEAVRY SAGVTTGGYG YDPRFDQIYI RGFSTTTLGD FRDGLKQFPA GFSTFRTEPY QLDRVEIIKG PAAVLYGQSV PGGLVDRRSK FPVENQVNEI AIQAGTFDRF QTAFDIGGAA SPDKSLLYRL VGVARSGDTN FDVADQRLML APSLTWRPTA DTTLTTYALV QKDETDSSVA ALNRNGKLLT VNGEYLRASD PKYDYLKLQQ VQTGYKLEHR FDDVFTFRQH TRFSNLKTDS RYLSGSFANT TTSIYNRAAY AVGDEQTSWQ TDNNLQADFA TGPVAHRVLA GVNYDHNVWD FQFGGSGVQS AYALDISNPT YGIAGATPAY TSGSRSTQEQ VGVYLQDQMR LGGWHLSLAG RHDWADQTRI NTYTNAVTGQ RNDSAFSYSA GLLYHFDNGV APYVSYATSF QPTTSMAIDG SVLAPSEGEQ FEAGVKYQPR ADVLLTASVY DLTEKNAAKL AGYVNGVAYY ASVGEIHVQG VELEARARLT PELETVTAYT FSDAEITKTT VASELNKVPA VTPKHTASSW LNYSFLNGPL DGLGLGVGVR YIDATWTSNA NTDRNNGYTL VDLAMRYDLG KLARQFAGFQ ASVNANNIAD EQIAVCNAGY CYLSQGRTVI GTLRYRW
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