Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2652 |
Symbol | |
ID | 3910444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3030753 |
End bp | 3031436 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637884551 |
Product | MerR family transcriptional regulator |
Protein accession | YP_486265 |
Protein GI | 86749769 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00282985 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0609514 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACAAAG CGCCGGATGC ATTCCGAACC ATCAGCGAAG TCGCCGACGA ACTCGACATT CCGCAGCACG TCTTGAGGTT CTGGGAGACG CGGTTCACCC AGATCAAGCC GATGAAGCGC TCGGGCGGCC GGCGCTACTA CCGGCCGGAC GACGTCGACC TGCTCAAGGG CATCCGCCGG CTGCTGTACG GCGAAGGCTA CACCATTCGC GGCGTCCAGC GGATCCTCAA GGAGCACGGC ATCAAGTCGG TGCAGCGGCT CGCCGACAAC GAGGCCAGCG CCACTTTCGG CGCGGTCGAG GAAGCGATCG GCCGCAGCGT CGCCGAGGAA GACTACGAGC CCGCGCCCGG CGGCATCGAT CTCGACGACG ACGACTACGA GGGCGAGAAC GAGGGCCTCG ACCTGCACGC CATGATGGCG GAACCCGACC TGCGCGCCGC AGCGGCACCG GCCCGCTCGG CCAGCCAGGC AACGGCCCGT CGCGCCCCCG CATTCGAGGA CGACGATGAC GACCTGCCGG CAATGGCGTC GCCGGCGCCA CGGCTGAATC TGCCGCCGCT GGACCTGCCG CCGGCGAATA ATGCCCCGGC GCGTCCGCCG GTCGATCTCG CCCCGCTGAA GGCCGTGCTG CAGGACCTGA TCGCCTGCCG CGAGGCGCTC GACGCCGCAA TGAAGGACGG CTGA
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Protein sequence | MDKAPDAFRT ISEVADELDI PQHVLRFWET RFTQIKPMKR SGGRRYYRPD DVDLLKGIRR LLYGEGYTIR GVQRILKEHG IKSVQRLADN EASATFGAVE EAIGRSVAEE DYEPAPGGID LDDDDYEGEN EGLDLHAMMA EPDLRAAAAP ARSASQATAR RAPAFEDDDD DLPAMASPAP RLNLPPLDLP PANNAPARPP VDLAPLKAVL QDLIACREAL DAAMKDG
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