Gene RPB_2623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2623 
Symbol 
ID3910415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3005621 
End bp3006673 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content68% 
IMG OID637884522 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_486236 
Protein GI86749740 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.660287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.92859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCA AATTCGGCCG TCCCATCGAA ATGCGCGACC CCGCCCCCCG GCCGTCCGCC 
CCGTGCCTCG ACCTCACCGT GCGCCCGCGT CGCAACCGCA AGTCCGAATG GGCTCGCCGG
CTGGTGCGGG AGAATTGCGT CACCACGGAC GACCTGATCT GGCCGCTGTT CGTGGTCGAA
GGCAGCAATC AGCGGGTCGA GATCGCCTCG ATGCCGGGCG TCGAGCGGCT CAGCGTCGAT
CAGGTGGTTC GCGCCGCCGA GCGCGCCGCC AAACTCGACA TCCCCTGCAT TGCGCTGTTC
CCCTACACGG ACCCGTCGCT GCGCGACGAG CACGGCACGG AAGCGACCAA CGCCGAGAAC
CTGGTGTGCC GCACGGTGCG CGCCATCAAG AAGGAGTTCC CCGAGATCGG CGTGCTGTGC
GACGTGGCGC TCGATCCGTT CACCAGCCAT GGCCATGATG GCCTGATCCA GGACGGCCGC
ATCCTCAACG ACGAGACCGT CGCGGTGCTG GTCCAACAGG CGCTGGTGCA GGCCCAGGCC
GGCTGCGACG TGATCGCGCC GTCCGACATG ATGGACGGCC GCATCGGCGC CATCCGCGCA
GGCCTCGACG ACGCCGGCTT CCAGGACGTC CAGATCATGG CCTATGCGGC GAAATACGCC
TCGGCGTTCT ACGGCCCGTT CCGCGACGCG ATCGGCTCGG CCAAGGCGCT GACCGGCGAC
AAGCGCACCT ACCAGATGGA CCCGGCCAAC ACCGACGAGG CGATCCGCGA GGTCGAACTC
GACCTCGCCG AGGGCGCCGA TATGGTCATG GTGAAGCCCG GCATGCCCTA TCTCGACATC
GTCCGCCGGG TGAAGGAGAC CTTCGCGGTG CCGACCTTCG CCTATCAGGT GTCGGGCGAA
TACGCGATGA TCGCCGCGGC CGCGAACAAC GGCTGGCTCG ACGGCGAGCG GGCGATGATG
GAGAGCCTGC TCGGCTTCAA GCGCGCCGGC GCCGACGGCG TACTGACCTA CTTCGCCCCG
CAGGCCGCCG AGAAGCTGAA ACAGCAAGGC TGA
 
Protein sequence
MAIKFGRPIE MRDPAPRPSA PCLDLTVRPR RNRKSEWARR LVRENCVTTD DLIWPLFVVE 
GSNQRVEIAS MPGVERLSVD QVVRAAERAA KLDIPCIALF PYTDPSLRDE HGTEATNAEN
LVCRTVRAIK KEFPEIGVLC DVALDPFTSH GHDGLIQDGR ILNDETVAVL VQQALVQAQA
GCDVIAPSDM MDGRIGAIRA GLDDAGFQDV QIMAYAAKYA SAFYGPFRDA IGSAKALTGD
KRTYQMDPAN TDEAIREVEL DLAEGADMVM VKPGMPYLDI VRRVKETFAV PTFAYQVSGE
YAMIAAAANN GWLDGERAMM ESLLGFKRAG ADGVLTYFAP QAAEKLKQQG