Gene RPB_2603 details

Gene Information

• Locus tag: RPB_2603
• Symbol: mscL
• ID: 3910395
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris HaA2
• Kingdom: Bacteria
• Replicon accession: NC_007778
• Strand: +
• Start bp: 2988060
• End bp: 2988491
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637884503
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_486217
• Protein GI: 86749721
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.240683
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTTCAAGG AATTCCGTGA ATTCGCGATG AAGGGCAACG TCGTCGACCT CGCGGTCGGC 
GTCATCATCG GTGCGGCGTT CGGCGGCATC GTCAGTTCGC TGGTGGCCGA CGTCATCATG 
CCGATCATCG GCGCGATCAC CGGCGGGCTC GATTTCTCGA ACTACTTCAC GCCGCTGTCG 
AAGGCGGTGA CGGCGAACAC GCTGGTGGAA GCGAAGAAGC AGGGCGCGGT GCTGGCCTGG 
GGCAGCTTTC TCACGCTGAC GCTGAACTTC CTGATCGTCG CCTTCGTGCT GTTCCTGGTG 
GTGCGGGCGA TGAACCGGCT GAAGCGCAAG GACGAGGCCG CCCCCGCGCC GCCGGCGAAG 
CCGACCCCGG AGCAGGAACT GCTCGCCGAG ATACGCGATA TCCTGAAGAG CGGCAGCCGC 
CCGCAGGCTT GA 

 

Protein sequence

MFKEFREFAM KGNVVDLAVG VIIGAAFGGI VSSLVADVIM PIIGAITGGL DFSNYFTPLS 
KAVTANTLVE AKKQGAVLAW GSFLTLTLNF LIVAFVLFLV VRAMNRLKRK DEAAPAPPAK 
PTPEQELLAE IRDILKSGSR PQA