| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2598 |
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| Symbol | |
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| ID | 3910390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2980197 |
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| End bp | 2981477 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637884498 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_486212 |
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| Protein GI | 86749716 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.258492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.437082 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCACA GCATGACTGA GCCAGTTCGA ACTCCTCCTT TTGCGCCATT CGAATGGCTC
CTGTCCGGGC GCTACCTCCG CGCGCGCCGC CGTGAGGGGT TCATCTCGGT GATCGCCGGG
TTCTCGTTTC TCGGCATCAT GCTCGGCGTC GCGACGCTGA TCATCGTGAT GGCGGTGATG
AACGGCTTCC GCAAGGAACT GCTCGACAAG ATCCTCGGCC TCAACGGCCA TCTGCTGGTG
CAGCCGCTGG AAAGCCCGCT GACCGACTGG AAAGAGGTCG CCGATCGCAT CAGCGGCGTG
GCGGGCATCA AGCTCGCGGC GCCGGTGATC GACGGCCAGG CGCTGGCGTC GTCGCCGTTC
AATGCCTCCG GCGTGCTGGT GCGCGGCATC CGCGCCGACG ACCTCAACAA TCTGTCGTCG
ATCGCCAATC ACATCAAGCA GGGCACGCTC GACGGCTTCG ACGAAGGGCA GGGCGTCGCG
ATCGGGCGCA GGCTCGCCGA TCAATTGTCG CTGCACGCCG GCGACAGCGT CACGCTGGTG
GCGCCGCGCG GCGCGGTGAC GCCGATGGGC ACCACGCCGC GGATCAAGCC GTACAAGATC
GCCGCCGTGT TCGAGATCGG CATGTCGGAA TACGACTCGA CCTTCGTGTT CATGCCGCTG
AAGGAGGCGC AGGCCTATTT CAACCGCAAT AACGACGTCA CCGCGATCGA GGTCTACACC
ACCAATCCGG ACAGGATCGA CGCCTTCCGC AAGAGCGTCA CCGAGGCCGC AGGCCGGCCG
GTGTTCCTGG TCGATTGGCG GCAGCGCAAT TCGACCTTCT TCAACGCGCT GCAGGTCGAG
CGCAACGTGA TGTTCCTGAT CCTGACGCTG ATCGTGCTGG TGGCGGCGCT CAACATCGTC
TCCGGCCTGA TCATGCTGGT GAAGGACAAG GGCAGCGATA TCGCCATCCT GCGCACCATG
GGGGCGACGC AAGGATCGAT CATGCGGGTG TTCCTGATCA CCGGCGCTGC GATCGGCGTG
GTCGGCACGC TGACCGGCTT CGTCGTCGGG CTGGTGATCT GCCTGAACAT CGAATCGATC
CGGCAATTCC TGTCCTGGGT GACCAATACC GAGCTGTTTT CGCCGGAGCT GTACTTCCTG
TCGAAGCTGC CGGCCGAGGT CGATTTCGCC GAGACCAGCG CGGTGGTGAT CATGGCGCTG
ACGCTGTCCT TCCTGGCGAC GCTATATCCG TCGTGGCGCG CGGCGCGGCT CGATCCCGTC
GACGCGCTCC GCTATGAGTG A
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| Protein sequence | MDHSMTEPVR TPPFAPFEWL LSGRYLRARR REGFISVIAG FSFLGIMLGV ATLIIVMAVM
NGFRKELLDK ILGLNGHLLV QPLESPLTDW KEVADRISGV AGIKLAAPVI DGQALASSPF
NASGVLVRGI RADDLNNLSS IANHIKQGTL DGFDEGQGVA IGRRLADQLS LHAGDSVTLV
APRGAVTPMG TTPRIKPYKI AAVFEIGMSE YDSTFVFMPL KEAQAYFNRN NDVTAIEVYT
TNPDRIDAFR KSVTEAAGRP VFLVDWRQRN STFFNALQVE RNVMFLILTL IVLVAALNIV
SGLIMLVKDK GSDIAILRTM GATQGSIMRV FLITGAAIGV VGTLTGFVVG LVICLNIESI
RQFLSWVTNT ELFSPELYFL SKLPAEVDFA ETSAVVIMAL TLSFLATLYP SWRAARLDPV
DALRYE
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