Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2574 |
Symbol | |
ID | 3910366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2955470 |
End bp | 2956084 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637884474 |
Product | NADH dehydrogenase subunit C |
Protein accession | YP_486188 |
Protein GI | 86749692 |
COG category | [C] Energy production and conversion |
COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0228869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.121819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGACA ACGGGCTCGA CACCCTGGGT CAGACGATCG TCGGCGCCTT GCCGGGCGCC GCGATCGGTC ATTCGATCGC ATACGGCCAG CTGACGGTGA CGATCGACGC CGCGAAGGTG GTGGAGGTGG CGCGTTTCCT GCGCGACGAT CCGCGCTGCC GCTTCGTCAA CATCGTCGAC GTCACCGCGG TCGACTATCC CGGCCGGGTG CCGCGGTTCG ATCTGGTCTA CCACTTCCTG TCGCCGGCGC TGAACGCGCG GATCCGGCTG CGCGCCGAGG TCGGCGAGAC CACGCTGGTG CCGTCGATCA TCGACGTGTT TCCGGGCACC GACTGGTTCG AGCGCGAGGT CTATGATCTC TACGGCATCG TCATCACCGG CCATCCCGAC ATGCGCCGGA TTCTGACCGA CTACGGGTTC GACGGTCACC CGCTGCGCAA GGACTTTCCG CTCACCGGTT TCGTCGAGGT CCGCTACGAC GACGACCAGA AGCGCGTGGT CTACGAGCCG GTGCGGCTCA ATCAGGAATT CCGCAAGTTC GACTTCCTGT CACCGTGGGA AGGCGCGGAC TATCCGGTGC TGCCGGGCGA CGAGAAGGCG GGGGTGAAGC CGTGA
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Protein sequence | MDDNGLDTLG QTIVGALPGA AIGHSIAYGQ LTVTIDAAKV VEVARFLRDD PRCRFVNIVD VTAVDYPGRV PRFDLVYHFL SPALNARIRL RAEVGETTLV PSIIDVFPGT DWFEREVYDL YGIVITGHPD MRRILTDYGF DGHPLRKDFP LTGFVEVRYD DDQKRVVYEP VRLNQEFRKF DFLSPWEGAD YPVLPGDEKA GVKP
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