Gene RPB_2572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2572 
Symbol 
ID3910364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2954477 
End bp2954842 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content57% 
IMG OID637884472 
ProductNADH dehydrogenase subunit A 
Protein accessionYP_486186 
Protein GI86749690 
COG category[C] Energy production and conversion 
COG ID[COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.152062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.112665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCA TTCTGCCGAA CTATCTACCA ATCGTCGTAT TCATTCTTGT TGCGGCTGGA 
CTGAGCTTTG TCCTCCTGGT GGCGCCTTTT GCCGTCGCCT ATCAGCAGCC CGACCCCGAA
AAGCTCTCGG CTTATGAATG CGGGTTCAAC GCTTTCGGCG ACGCCCGCAT GAAGTTCGAC
GTCAGGTTCT ACCTGGTCGC CATCCTGTTC ATCATCTTCG ACCTCGAAGT CGCTTTTCTG
TTTCCATGGG CGGTCGCGTT CGGGAAACTC GGCGCGACCG GCTTCTGGTC GATGATGGTG
TTTCTCGGCG TGCTGACCGT CGGCTTCGCG TATGAGTGGA AGAAGGGTGC GCTCGAATGG
GATTGA
 
Protein sequence
MSGILPNYLP IVVFILVAAG LSFVLLVAPF AVAYQQPDPE KLSAYECGFN AFGDARMKFD 
VRFYLVAILF IIFDLEVAFL FPWAVAFGKL GATGFWSMMV FLGVLTVGFA YEWKKGALEW
D