| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2521 |
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| Symbol | |
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| ID | 3910310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2880002 |
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| End bp | 2881054 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637884420 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_486137 |
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| Protein GI | 86749641 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.848783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACAA CAACAACAAA GCCGTCCTCG GGAGACGAAA CGCCGGCGGG ATCGTCGATC
GATCCGGCCG AAGCCGCGCG CCTGCGGCAC GAGCTGCGCG AGGCCAGCCA GGCGCTCGAG
ACGCTCTACG CCGCGCTCGA CAATGTCGAC AGCGGCCTGC TGATCCTCAA CAAAGAGCTG
CGCGCGGTCT ACAGCAATCC GATCCTGCAC GTGATGTTCC GGGCCAACAG TTGCGAGGAG
ATCCGGCAGA CGCGGCCGTT CTACGCCGAC ATGCTGGCGG CCGCGGCCCA GGCGGTCGCG
GTCGATCTCG ACGACTACGT CGCGCGCCGG CTGGCCTGGG TGCAGTCCGG CGATCCGAAG
CCGATGGATC TGGCGATGAT CGACGGCAAG GCGCTGCGCT GCCATCTCGC CGTGCTGCCG
GACGGCGGCC GCATGCTGAT CTACAGCGAC GTCACCGACA TCGTGCGCAA CGCCGAAGAG
CTCGAGCGGC TGGCGACGAC CGACGGCATG ACGGGGATCT TCAACCGCCG GCACTTTCTG
ACGCTGGCCG ATCGCGAATG GGCGCGCGCC CGCCGCTATG GTCGGCCGTT GTCGTGCCTG
ATGATCGACA TCGACCATTT CAAATCGATC AACGACGATT TCGGCCATCA GGTCGGCGAC
GACATGATCG TGCATCTGGC GAAATTGGCG CGCGACTGCA AGCGCGACTG CGACGTGCTC
GCCCGGATCG GCGGCGAGGA ATTCGCGCTG CTGCTGCCAG AGACCGATCT GCCGCAGGCG
CTGGCGGTGG CGGAACGACT GCGCGGCGAG GTCGCCGCCA GTTCATTGCT GATGGCCTCG
GGTTCGGTCC GCGCCACCGT CAGCATCGGC GCGGCGACGT CGGCCGCGAC CATCGACGGC
ATTTCCGATC TGATGCGGGC CGCCGATCGC GCCCTCTACG AGGCCAAGCA CGGCGGACGC
AACCGGGTGG TCTGTCACGT CTCGCCCGAC GCGGTGCCGA GTGTCGCGGC GCCATGCCTC
GATCCGTCGC TCACGGCGGC GCGCCTCTCC TAA
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| Protein sequence | MPTTTTKPSS GDETPAGSSI DPAEAARLRH ELREASQALE TLYAALDNVD SGLLILNKEL
RAVYSNPILH VMFRANSCEE IRQTRPFYAD MLAAAAQAVA VDLDDYVARR LAWVQSGDPK
PMDLAMIDGK ALRCHLAVLP DGGRMLIYSD VTDIVRNAEE LERLATTDGM TGIFNRRHFL
TLADREWARA RRYGRPLSCL MIDIDHFKSI NDDFGHQVGD DMIVHLAKLA RDCKRDCDVL
ARIGGEEFAL LLPETDLPQA LAVAERLRGE VAASSLLMAS GSVRATVSIG AATSAATIDG
ISDLMRAADR ALYEAKHGGR NRVVCHVSPD AVPSVAAPCL DPSLTAARLS
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