Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2487 |
Symbol | |
ID | 3910276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2846177 |
End bp | 2846380 |
Gene Length | 204 bp |
Protein Length | 67 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637884386 |
Product | cold-shock DNA-binding domain-containing protein |
Protein accession | YP_486103 |
Protein GI | 86749607 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0454544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAGG GCACCGTCAA GTGGTTCAAC CCGACCAAGG GTTATGGTTT CATCCGTCCT ACCAGCGGCG ACAAGGACGT CTTCGTCCAT ATCTCGGCGG TCGAGCGCGC CGGTCTCAGC ACTCTGAATG AAAACCAGGC GATCGAATAC GATCTGGTCG AAAATCGCGG CAAGACCTCG GCGGAGAACC TCAAGCTCAC GTGA
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Protein sequence | MQKGTVKWFN PTKGYGFIRP TSGDKDVFVH ISAVERAGLS TLNENQAIEY DLVENRGKTS AENLKLT
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