| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2449 |
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| Symbol | |
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| ID | 3910238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2804705 |
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| End bp | 2805979 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637884348 |
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| Product | major facilitator transporter |
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| Protein accession | YP_486065 |
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| Protein GI | 86749569 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0110452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.393497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGG CCGGCCACGC GAGCGGGACG AGCGCGCCGG CACCCGGCGC GCGCCCCGCC
GCGGTCGGCT TCATCTTCGT CACCATCCTG CTCGACATGC TGAGCGTCGG CATGATCCTG
CCGATCCTGC CGAAGCTGAT CGAGAGCTTC TCCGACAACG ACACCGCGGC TGCGGCCAAG
ATCTACGGCC TGTTCGGCAC GGCCTGGGCG CTGATGCAGT TCGTCGCGTC GCCGGTGCTG
GGCGCGCTGT CTGATCGTTT CGGCCGCCGC CGGGTGATCC TGCTGTCCAA TCTCGGTCTC
GGGCTCGATT ACATCCTGAT GGCGCTGGCG CCGACGCTGG CCTGGCTGTT CATCGGCCGG
GTGATCTCCG GCATCACCTC GGCGAGTATC TCAACCTCGT TCGCCTATAT CGCCGACGTC
ACACCTGCGG AAAAACGCGC GGCCGTGTTC GGCAAGGTCG GCGCCGCCTT CGGCCTCGGC
TTCATCTTCG GCCCGGCGAT CGGCGGATTG CTCGGCGGCG TCGATCCGCG GCTGCCGTTC
TGGGTGGCGG CCGGCTTGAG CCTGTGCAAC GCGCTGTATG GCTTGTTCGT GCTGCCGGAA
TCGCTGCCGC CGGAGCGGCG GTCGCCGTTC CGCTGGCGGG CCGCCAATCC GATCGGCGCG
GTGCAGTTGC TGTCGTCGAA TGCGATACTC GCCGGTATGG CGATCGTGGC GTTCTGCGCC
GAGGTCGCCC ATGTGGCGCT GTCCGCGACC TTCGTCCTCT ACGCCAGCTA TCGCTACGCG
TGGGATCAGA CCACGGTCGG TCTCGCCTTG GCCTTCGTCG GCTTCTGCAC TACCGTGGTG
CAGGGCTTTC TCGTCGGCCC CGCGGTCAAG CGGCTCGGTG AGCGGCGCGC CCAAGTGATC
GGCTATCTCG GCGGCGCAGC GGGCTTTCTG ATCTATGCGC TGGCGCCGAC CGGCGCGCTG
TTCTGGATCG GCATTCCGGT GATGACGCTG TGGGGCATCG CTAAGCCGGC GACCGCCGGG
GTGATGACGC GCCTGGTGGC GCCGGCGCAG CAAGGACAAT TGCAGGGCGC AACCACCAGC
ATGAACAGCA TCGCGGCGCT GATCGGGCCT TTCCTGTTCA CGGGCATCTT CGCCTATTTC
ATCGAGCCCG ATGCGCCGAT TTGGTTTCCC GGCGCGCCGT TCCTGCTCGC CGGCGCGCTG
CTGATGGTTT CGATGCTACT CGCAGGCATC TCGACGCCGC CGCAAAGCAA ATCAGGCGCC
GCAAGCGGCG CCTGA
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| Protein sequence | MTAAGHASGT SAPAPGARPA AVGFIFVTIL LDMLSVGMIL PILPKLIESF SDNDTAAAAK
IYGLFGTAWA LMQFVASPVL GALSDRFGRR RVILLSNLGL GLDYILMALA PTLAWLFIGR
VISGITSASI STSFAYIADV TPAEKRAAVF GKVGAAFGLG FIFGPAIGGL LGGVDPRLPF
WVAAGLSLCN ALYGLFVLPE SLPPERRSPF RWRAANPIGA VQLLSSNAIL AGMAIVAFCA
EVAHVALSAT FVLYASYRYA WDQTTVGLAL AFVGFCTTVV QGFLVGPAVK RLGERRAQVI
GYLGGAAGFL IYALAPTGAL FWIGIPVMTL WGIAKPATAG VMTRLVAPAQ QGQLQGATTS
MNSIAALIGP FLFTGIFAYF IEPDAPIWFP GAPFLLAGAL LMVSMLLAGI STPPQSKSGA
ASGA
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