| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2440 |
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| Symbol | gatB |
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| ID | 3910229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2796121 |
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| End bp | 2797605 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637884339 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_486056 |
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| Protein GI | 86749560 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0464074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAC CCGTCAAACC GTCCCAGCTC ATCAAGGGCG CCACCGGCGA TTGGGAAGTC
GTGATCGGGC TGGAGATCCA CGCCCAGGTC TCGTCCAACG CCAAGCTGTT CTCCGGTGCG
GCGACCGAAT TCGGCGGCGA TCCCAACAGC CACGTCTCGC TGGTCGACGC CGCGATGCCC
GGCATGCTGC CGGTGATCAA CGAGGAGTGC GTGAAGCAGG CGATCCGTTC GGGACTGGGA
CTGAACGCCC AGATCAACCT GCGCTCGGTG TTCGACCGCA AGAACTATTT CTATCCGGAT
CTGCCGCAGG GCTACCAGAT CAGCCAGTAC AAGTCGCCGA TCGTGGGCGA GGGCGAGGTC
GTGGTCGATC TGCCGGACGG CGACAGCACC ACCGTCGGCA TCGAGCGGCT GCATCTCGAA
CAGGACGCCG GCAAATTGCT GCACGATCAG GACCCGACTT CGACCTTCGT CGATCTCAAT
CGCTCCGGCG TTGCGCTGAT GGAGATCGTC TCCAAGCCGG ATCTGCGGTC GTCCGAACAG
GCCAAGGCCT ATGTGTCGAA GCTGCGCACC ATCCTGCGCT ATCTCGGCAC CTGCGACGGC
GACATGGAAA AGGGCAGCCT GCGCGCCGAC GTCAACGTCT CGGTGCGCAA GCCGGGCGAG
CCGTACGGCA CGCGGTGCGA GATCAAGAAC GTCAACTCGA TCCGCTTTAT CGGTCAGGCG
ATCGAATACG AGGCTCGCCG CCAGATCGGA GTTCTCGAAG ACGGCGGCGC GATCGTGCAG
GAGACACGGC TGTTCGATGC GGGCAAGGGC GAGACGCGGT CGATGCGTTC CAAGGAGGAG
GCGCACGACT ATCGCTACTT CCCCGATCCA GACCTGCTGC CGCTGGAATT CTCCCAGGCC
TATGTCGACG AGCTGAAGGC CGGGTTGCCG GAACTGCCGG ACCAGAAGAA GGCCCGGTTC
ATCGGCAGTT TCGGGCTCTC GCCGGACGAC GCGGGCGTGC TGGTGAGCGA GCGGGAGAGC
GCCGATTTCT ACGAGGCGGT GCTCGCCGCA CTTGCGGACG CCGCGCGCGA CGGCAAGCTC
GCGGCCAACT GGGTGATCAA CGAACTGTTC GGCCGCCTCA ACAAGGACGG CCAGAGCATC
GAGGTGTCGC CGGTCTCCGC CGCGCAGCTG GCTGCGATCG TCGACCTGAT CGGCGAAGGC
ACCATCTCCG GCAAGATCGC CAAAGAGCTG TTCGAAATCG TCTGGACCGA AGGCGGCGAT
CCGCGCGTAC TGGTCGAAGC GCGCGGCATG AAGCAGGTCA CCGACCTCTC CGCGATCGAG
AAGGTGGTCG ACGAGATCAT CGCCGGCAAT CCCGACAAGG TCGCGCAGGC GATCGCCAAG
CCGGCGATGC TCGGCTGGTT CGTCGGACAG GTGATGAAAT CGTCCGGCGG CAAGGCGAAC
CCGCAGGCCG TGAACGACCT CTTGAAGCGT AAGCTCGGTC TCTGA
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| Protein sequence | MNAPVKPSQL IKGATGDWEV VIGLEIHAQV SSNAKLFSGA ATEFGGDPNS HVSLVDAAMP
GMLPVINEEC VKQAIRSGLG LNAQINLRSV FDRKNYFYPD LPQGYQISQY KSPIVGEGEV
VVDLPDGDST TVGIERLHLE QDAGKLLHDQ DPTSTFVDLN RSGVALMEIV SKPDLRSSEQ
AKAYVSKLRT ILRYLGTCDG DMEKGSLRAD VNVSVRKPGE PYGTRCEIKN VNSIRFIGQA
IEYEARRQIG VLEDGGAIVQ ETRLFDAGKG ETRSMRSKEE AHDYRYFPDP DLLPLEFSQA
YVDELKAGLP ELPDQKKARF IGSFGLSPDD AGVLVSERES ADFYEAVLAA LADAARDGKL
AANWVINELF GRLNKDGQSI EVSPVSAAQL AAIVDLIGEG TISGKIAKEL FEIVWTEGGD
PRVLVEARGM KQVTDLSAIE KVVDEIIAGN PDKVAQAIAK PAMLGWFVGQ VMKSSGGKAN
PQAVNDLLKR KLGL
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