Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2439 |
Symbol | |
ID | 3910228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2794889 |
End bp | 2795989 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637884338 |
Product | signal transduction histidine kinase |
Protein accession | YP_486055 |
Protein GI | 86749559 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0424622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG ATGAAGGGGG GCCGTCTCCG CAAAGCGTCG ACGGGATTTT AGGCTCGTCA AAGATTGCGG TGGCGATCGA GAACGACCGC TACAAGCACC TGCTCGACAA TGTTCCGGTG GCCCTCGCGG TGTCGCGTGG CAACGGCGAC GATCAGCGGA TCGTCTATAT CAATCACGCT TTCGAAGATC TGATGTCGCT GGCCCCGGCC GACATCGAGG GGCAGGGCTG GAACTGCCTC GATGCGTTGA TCAACGAAGA CGATACGGCG CTGACGCTCG GCGCGGCGAT CCGGGACGGC GAGGATTTCA TCGGCGTGTT CCGCCCCACC GTGCCGCCCG ACCGGGTGCT GATCGTGCAG GCCTACGCCT CCGTGATCGA GAGCGACGAC GGCGTCGAGA ATTTCCGGAT CGCGGCGTTG GTCGATGTCG GCGGACGCGA GCGGGCGCAG ATCGAGCTGT TCGAGTCCCA GATCCGTGAA CGCGACACCC TGATGCGCGA GCTGCAGCAT AGGGTGAAGA ACAATCTGCA ATTGGTGACG GCGCTGGTGC GGCTCGAAGC GCGTTCGGCG GCCGAAGGCG AGACCGTCGC GCTGACGCGG CTCGCAAGCC GGATCGATGC GTTGACCGCG CTGTACCGGA TTTTGTCCGC AGAGAGTGCC GCCGGCAGCG ATATCGATCT CGGCCAATAT CTGTCGGATG TCACCGAGGC GGTGATGCAG GCCCATGGCA GCGAGGGGAT CGCCTACGAC CTCAATGTCG GGTACTGCCC GCTCTCGGTC AATGTGGCGA TGCCCGCCGG CCTCCTGGTG AACGAGATGC TGACCAACGC GCTGAAATAC GCCTTCGTCG GACGCCGCGG CGGCCGGATC AAGGTGATCT GTAGCGTCGA GAACGGTCGC GTCTCGGTGA TCGTCTCGGA CGACGGCGCC GGCCTGCCGG AAGGCCAGGA ATGGCCGTCG CCGCGCAAGC TCGGCGCGCT GATCCTGCAG ACCCTCAAGG AAAACGCCCG CAACGTTACG TTCCGGGCAG AGAGCATTCG CGGGCAGGGC ACGTTGTTCG CCCTCGGCTT CGAAGCGCCA CCGGCTCCGG CGACGAATTG A
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Protein sequence | MSADEGGPSP QSVDGILGSS KIAVAIENDR YKHLLDNVPV ALAVSRGNGD DQRIVYINHA FEDLMSLAPA DIEGQGWNCL DALINEDDTA LTLGAAIRDG EDFIGVFRPT VPPDRVLIVQ AYASVIESDD GVENFRIAAL VDVGGRERAQ IELFESQIRE RDTLMRELQH RVKNNLQLVT ALVRLEARSA AEGETVALTR LASRIDALTA LYRILSAESA AGSDIDLGQY LSDVTEAVMQ AHGSEGIAYD LNVGYCPLSV NVAMPAGLLV NEMLTNALKY AFVGRRGGRI KVICSVENGR VSVIVSDDGA GLPEGQEWPS PRKLGALILQ TLKENARNVT FRAESIRGQG TLFALGFEAP PAPATN
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