| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2438 |
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| Symbol | gatA |
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| ID | 3910227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2793329 |
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| End bp | 2794807 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637884337 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_486054 |
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| Protein GI | 86749558 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0952312 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC TGACTTCGCT GACGCTGGCC GAGGCCCGCG ATGGCCTCGT GAACAAGTCC
TTCACCGCGG TCGAACTGAC CGACGCGCAT CTCGCCGCAA TCGAAGCCGC GCGTGTGCTC
AACGCCTATG TGCTGGAGAC GCCGGATCAG GCACGGCAGA TGGCGCAGGC GGCGGATGCG
CAGATCGCCA AAGGCGAGGG CGGGCCGCTC GCCGGCATCC CGCTCGGCAT CAAGGATCTG
TTCGCCACCA AAGGCACGCG CACCACCGCC TGCTCGAAAA TTCTCGGAGA CTTCAAGCCT
CCCTACGAGT CGACCGTGAC GTCGCAGCTG TGGCGCGACG GCGCCGTGCT GCTCGGCAAG
CTCAACAACG ACGAATTCGC GATGGGCTCG TCGAACGAGA CATCGTGCTT CGGCCCGGTG
GTCAACCCAT GGCGGCGCGC GGGCTCGGAG ACCAAGCTGG TTCCTGGCGG CTCGTCCGGC
GGCTCGGCGG CGGCGGTGGC CGCCGGCCTC TGCCTCGGCG CCACCGCCAC CGACACCGGC
GGGTCGATCC GGCAGCCGGC GGCGTTCACC GGCACCGTCG GCATCAAGCC GACCTATGGC
CGCTGCTCGC GCTGGGGCAT CGTCGCGTTT GCGTCCTCGC TCGACCAGGC CGGTCCGATT
GCCCGCACGG TGCGCGACAG CGCGATCCTG CTCGGCTCGA TGGCCGGCTT TGACCCGAAG
GACACAACCT CGGTGGATCG CCCAGTGCCG AACTACGAAG CCGCGATCGG CGGCTCGGTG
AAGGGCATGA AGATCGGCAT CCCGAAGGAG TATCGGCTCG ACGGCATGCC GGCCGAGATC
GAGAAATTGT GGATGCAGGG CGCCGAGTGG CTGAAAGCGG CGGGCGCCGA ATTGGTCGAG
GTGTCGCTGC CGCACACCAA ATACGCACTG CCGGCCTATT ACATCGTGGC GCCGGCGGAA
GCCTCGTCGA ACCTCGCGCG CTACGACGGC GTGCGCTACG GCACCCGCGT CAACGGCCGC
AACATCGTCG AGATGTACGA GAACACCCGC GCGGCCGGTT TCGGCGCCGA GGTCAAGCGT
CGCATCATGA TCGGAACCTA TGTGCTGTCG GCGGGCTATT ACGACGCCTA TTATCTCCGC
GCCCAGAAGG TCCGCACCCT GATCAAGCGC GATTTCGAGC AGTGCTTCGA CCAGGGCGTC
TCCGCGATCC TGACGCCCGC GACGCCATCG GCGGCGTTCG GAATCGGCGA AAAAGGCGGC
GCCGATCCGG TCGAGATGTA CCTGAACGAC ATCTTCACCG TGACGGTGAA CATGGCGGGC
CTGCCGGGCA TCGCGGTTCC GGCGGGGAGC GACTCGCAGG GACTTCCGCT GGGGCTGCAA
CTGATCGGGC GGCCGTTCGA CGAGGAGACG TTGTTCTCCC TCGGCGACGT CATCGAGCAG
TCCGCCGGCC GGTTCACGCC GGCTAAGTGG TGGGCGTAG
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| Protein sequence | MTDLTSLTLA EARDGLVNKS FTAVELTDAH LAAIEAARVL NAYVLETPDQ ARQMAQAADA
QIAKGEGGPL AGIPLGIKDL FATKGTRTTA CSKILGDFKP PYESTVTSQL WRDGAVLLGK
LNNDEFAMGS SNETSCFGPV VNPWRRAGSE TKLVPGGSSG GSAAAVAAGL CLGATATDTG
GSIRQPAAFT GTVGIKPTYG RCSRWGIVAF ASSLDQAGPI ARTVRDSAIL LGSMAGFDPK
DTTSVDRPVP NYEAAIGGSV KGMKIGIPKE YRLDGMPAEI EKLWMQGAEW LKAAGAELVE
VSLPHTKYAL PAYYIVAPAE ASSNLARYDG VRYGTRVNGR NIVEMYENTR AAGFGAEVKR
RIMIGTYVLS AGYYDAYYLR AQKVRTLIKR DFEQCFDQGV SAILTPATPS AAFGIGEKGG
ADPVEMYLND IFTVTVNMAG LPGIAVPAGS DSQGLPLGLQ LIGRPFDEET LFSLGDVIEQ
SAGRFTPAKW WA
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