| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2416 |
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| Symbol | |
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| ID | 3909550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2768633 |
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| End bp | 2769391 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637884315 |
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| Product | NUDIX hydrolase |
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| Protein accession | YP_486032 |
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| Protein GI | 86749536 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00201354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.156459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA CGGTCACGCA GGCTGCGCAC ACGGTCGAAC AGGGCGAGAA GGAAGCCGAT
CACCATCCCT ATTTCCGTCC CAAGGACGCC GCGACGCTGA TCCTGGTCGA TCGCAGCGGC
AGTATCCCGA AGGTTCTGGT CGGCCGGCGC CACGACAAGG TGGTGTTCAT GCCCGGCAAG
TTCGTGTTCC CCGGCGGCCG GGTCGACAAG TTCGACAACC GCGTGCCGGT CGCAGCGCAG
ATTCCGCCGG AGCTCGAGGC CAATCTGCTC AAGGGCAGCC CGAGGATCAC CCCCGCCCGC
GCCCGCGCGC TGGCGATCGC GGCGATCCGC GAGGCTTGCG AGGAGACCGG CCTGTGCCTC
GGCTGCAAGG CGGACGGCGC CAAGACCAAT CTCGATGGCC CATGGCAACC CTTCGCCGAG
GCCGGGCTGT TGCCCGACCC GTCCGGCCTG TACCTGATCG CCCGCGCCAT CACCCCGCCC
GGCCGGGTGC GCCGGTTCGA CACCCGTTTC TTCACCGCCG ATGCCTCGGC GATCGCCCAC
CGGGTCGAGG GTGTCGTCCA TGCCGATGCC GAACTGGTCG AACTGGTCTG GGTCGAGCTC
GGTTCCAGCC CGCTCGCCGA TCTGCATGCG ATGACCAAGA ACGTGCTCGG CGAGCTGCAC
CGCCGCCTCG CCACCGGCCC GCTCCGCCAC GACGCGCCGG TGCCGTTCTT CCATTTCTAC
GGCGGCAAGA TGCAGAAGGA CCTGCTGCCG GGCGCCTGA
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| Protein sequence | MSETVTQAAH TVEQGEKEAD HHPYFRPKDA ATLILVDRSG SIPKVLVGRR HDKVVFMPGK
FVFPGGRVDK FDNRVPVAAQ IPPELEANLL KGSPRITPAR ARALAIAAIR EACEETGLCL
GCKADGAKTN LDGPWQPFAE AGLLPDPSGL YLIARAITPP GRVRRFDTRF FTADASAIAH
RVEGVVHADA ELVELVWVEL GSSPLADLHA MTKNVLGELH RRLATGPLRH DAPVPFFHFY
GGKMQKDLLP GA
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