| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2399 |
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| Symbol | |
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| ID | 3909533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2754378 |
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| End bp | 2755370 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637884298 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_486015 |
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| Protein GI | 86749519 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.537476 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCATCG GCATGCTGCG CGGCATCGCG GTCGTTCTGC TCGTCGCGCT GACAGCGCCA
AGCTTCACGC GCGCCGAGGA GGCGCAGCCG TCGAAGCAAG GCGAGATGCA GAGCAAGCCC
GAGCCGCAGG CGAAGTCGGA CCCGGCGGAG CCCGCGGCAA AGCCTGTCGA GCAGCCCGGA
GAGAAACCCG CCGACCGCGA CACCCGCGAG TCGATCTGCC TGATGATCGA GTCGGCGGCG
AAGGCGCATG ATCTGCCGCT GGAGTTCTTC GCCCGCGTGA TCTGGCAGGA GAGCCGGTTT
CAGCCGGACG CCATCGGACC GGTGACGCGC AACGGTCAGC GCGCCCAGGG CATCGCGCAA
TTCATGCCCG GCACCGCGAC GGAACGCAGC CTGCTCGATC CGTTCGACCC GGTGCAGGCG
CTGCCGAAAT CCGCCGAATT CCTCAGCGAG TTGCGCGGTC AGTTCGGCAA TCTCGGACTG
GCGGCGGCGG CATACAATGC CGGTCCGCGC CTGGTGCAGG AATGGATCGC CGGCACCGGC
CCGATGCCGC AGCAGACCCG CGACTACGTC TATGCGATCA CCGGCACCTC GGTCGACGAC
TGGGCCGCCG CCGGCCGCAA GACCAAGCCC GCGACGCAAG CCGCCGGCGA TTGCCGCACG
CTGATGGCGC TGCTGCGGCG TGCGCCGAAC CCGTTCGTGA CGCAGCTCGA AGCGCGGGTG
AAACTCGGCG CCGACAAACC TTGGGGCGTG CAACTCGCGG CCGGCTTCAA TCGCGACCGG
GCGCTGGCGA TGTATGCGCG CGCGATGGCG CGGCTGAGCG CGGTGATCGG CGATCACGAT
CCGAGCCTGT CGAGCGCGGT GTTCCGCAGC CGCGGTACGC GGCCGTTCTA TCAGGTGCGG
ATCGGTGCCG AGACGCGCAC TGAAGCGAAC GATCTGTGCA GCCGGATACG CCGCGCCGGC
AGCGCCTGTC TGGTGCTGCG CAATCGCGGC TGA
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| Protein sequence | MLIGMLRGIA VVLLVALTAP SFTRAEEAQP SKQGEMQSKP EPQAKSDPAE PAAKPVEQPG
EKPADRDTRE SICLMIESAA KAHDLPLEFF ARVIWQESRF QPDAIGPVTR NGQRAQGIAQ
FMPGTATERS LLDPFDPVQA LPKSAEFLSE LRGQFGNLGL AAAAYNAGPR LVQEWIAGTG
PMPQQTRDYV YAITGTSVDD WAAAGRKTKP ATQAAGDCRT LMALLRRAPN PFVTQLEARV
KLGADKPWGV QLAAGFNRDR ALAMYARAMA RLSAVIGDHD PSLSSAVFRS RGTRPFYQVR
IGAETRTEAN DLCSRIRRAG SACLVLRNRG
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