Gene RPB_2344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2344 
Symbol 
ID3909342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2693067 
End bp2694125 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content68% 
IMG OID637884241 
Producthypothetical protein 
Protein accessionYP_485960 
Protein GI86749464 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.163785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.669867 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCCC TGGTGATACT TCTTTTGATC GCCGCGGCGG CCTTGGCGGG CTGGCTGTAT 
TTTCACGGCT CGTTCGACAG CTACCGGCAG AAGACCGGCG AAGCCTTCAT CCGGGTCGGC
GATTTTCGCG CGGCGCATCT GCCGTCCGCG AACTATGCCG GGCATTATCT GCCTTACGCG
CTGTTCGCGC TGCGGGCCTA TGATCCGGCC GGACCCGGCG GTTCGCCGAA GCTGAATGCG
TTGCTGGAGC GGCCGGCACC GGACGATCCT GCGCGGAGCC GGATCACCGC CGAACTGCGC
GGCGGCTGGC TCGGCGACTG GGCGTTGATC GAGCAGGGCG AGGGGCCGTT GCCGTGTCCC
GACGGCGACG GGCAGTGCGG CGGCCGGGCG CTCGGCGGGC TCGGCTACAA GGTGTTCAGC
TCGCAGGCGC GCAACGAGAT CGTCGTCGCC TTCCGCGGCA CCGACTTCAA GGAGGCGCAT
GACTGGATCG CCAATCTGCG CTGGGTGACG CGGTTTCTGC CGTACTATGA TCAATACGCG
CAGGTGCAGC GCCACATCGG GCCGATCCTC GACCGGGCGC TGGCGGCGCA CAAGCTGGCT
GATCCGACGA TCGTCGCCAC CGGGCATTCG CTCGGCGGCG GGCTGGCGCA GCAGGCGGCC
TACAAGGACG GCCGCATCCG CGCGGTCTAT GCGTTCGATC CCTCGACCGT CACCGGCTAT
TACGATCCCG GCGTTCCGGG CAAGGAGAAT TCGGTCGGCC TGCTGATCGA TCGGGTGTAT
CAGCGCGGCG AGGTGCTGGC CTATCTGCGG TTCCTGATGA CGCAGCTTTA TCCGGTGGCG
GCCTTCAATC CGCAGATCCG CACCGTGCGG TTCAGCTTCG GTGCCGAGGG CGGCGTCGTC
GCCAGGCACA ACATGGCGGA TCTCGCCGCC GGCCTGCTCG AAACCTCGGG AACGCCGGAG
GCATGGGCCG CGCGCGCCCT GCCGCTGCCG AATGCGCCCG GCAGCGACCC CGGCGAGACC
TGGATCTATC GCCTCGTCGA CTGGATCAAC CGCAAGTAA
 
Protein sequence
MRALVILLLI AAAALAGWLY FHGSFDSYRQ KTGEAFIRVG DFRAAHLPSA NYAGHYLPYA 
LFALRAYDPA GPGGSPKLNA LLERPAPDDP ARSRITAELR GGWLGDWALI EQGEGPLPCP
DGDGQCGGRA LGGLGYKVFS SQARNEIVVA FRGTDFKEAH DWIANLRWVT RFLPYYDQYA
QVQRHIGPIL DRALAAHKLA DPTIVATGHS LGGGLAQQAA YKDGRIRAVY AFDPSTVTGY
YDPGVPGKEN SVGLLIDRVY QRGEVLAYLR FLMTQLYPVA AFNPQIRTVR FSFGAEGGVV
ARHNMADLAA GLLETSGTPE AWAARALPLP NAPGSDPGET WIYRLVDWIN RK