Gene RPB_2293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2293 
Symbol 
ID3909674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2652673 
End bp2653863 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content64% 
IMG OID637884190 
Productelongation factor Tu 
Protein accessionYP_485909 
Protein GI86749413 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.404032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAG CAAAATTCGA ACGTACCAAG CCGCATTGCA ATATCGGGAC GATCGGTCAC 
GTCGACCATG GCAAGACGTC GCTGACGGCG GCGATCACCA AGGTTCTGGC GGAGACGGGC
GGCGCGACGT TCACGGCCTA CGACCAGATC GACAAGGCGC CGGAAGAGAA GGCGCGCGGC
ATCACGATTT CGACGGCTCA CGTCGAATAC GAGACGACGA ACCGCCACTA CGCGCATGTC
GACTGCCCGG GCCACGCCGA CTACGTCAAG AACATGATCA CCGGTGCGGC GCAGATGGAC
GGCGGCATTC TGGTGGTGTC GGCGGCCGAC GGCCCGATGC CGCAGACCCG CGAGCACATC
CTGCTGGCGC GCCAGGTCGG CGTTCCGGCG CTGGTGGTGT TCCTGAACAA GTGCGACATG
GTCGACGATC CGGAACTGCT CGAGCTGGTC GAGATGGAAG TGCGCGAGCT TCTGTCGAAG
TACGACTTCC CGGGCGACGA CATTCCGATC ATCAAGGGCT CGGCGCTGGC CGCTCTGGAG
AACTCGGATC AGAAGCTCGG CCACGACGCG ATCCTGGAGC TGATGAAGGC GGTCGACGCC
TACATTCCGC AGCCGGAGCG CCCGATCGAC CAGCCGTTCC TGATGCCGGT CGAAGACGTG
TTCTCGATCT CGGGCCGCGG CACGGTGGTG ACCGGCCGCG TCGAGCGCGG CATCGTCAAG
GTCGGCGAGG AAATCGAGAT CGTCGGCATC CGCGACACCC AGAAGACGAC CTGCACGGGC
GTCGAAATGT TCCGCAAGCT GCTCGACCAG GGCCAGGCCG GCGACAACAT CGGCTGCCTG
CTGCGCGGCA CCAAGCGCGA AGACGTCGAG CGCGGCCAGG TGCTGTGCAA GCCGGGTTCG
GTGAAGCCGC ACACCAAGTT CAAGGCCGAG GCCTACATCC TGACCAAGGA AGAGGGCGGC
CGTCACACCC CGTTCTTCAC CAACTATCGT CCGCAGTTCT ACTTCCGCAC CACCGACGTC
ACCGGCGTCG TGCATCTGCC GGAAGGCACC GAGATGGTGA TGCCGGGCGA CAACATCGCC
ATGGAAGTGC ACCTGATCGT GCCGATCGCG ATGGAAGAAA AGCTGCGCTT CGCCATCCGC
GAAGGCGGCC GCACCGTCGG CGCCGGCGTG GTGGCCTCGA TCATCGAGTA A
 
Protein sequence
MAKAKFERTK PHCNIGTIGH VDHGKTSLTA AITKVLAETG GATFTAYDQI DKAPEEKARG 
ITISTAHVEY ETTNRHYAHV DCPGHADYVK NMITGAAQMD GGILVVSAAD GPMPQTREHI
LLARQVGVPA LVVFLNKCDM VDDPELLELV EMEVRELLSK YDFPGDDIPI IKGSALAALE
NSDQKLGHDA ILELMKAVDA YIPQPERPID QPFLMPVEDV FSISGRGTVV TGRVERGIVK
VGEEIEIVGI RDTQKTTCTG VEMFRKLLDQ GQAGDNIGCL LRGTKREDVE RGQVLCKPGS
VKPHTKFKAE AYILTKEEGG RHTPFFTNYR PQFYFRTTDV TGVVHLPEGT EMVMPGDNIA
MEVHLIVPIA MEEKLRFAIR EGGRTVGAGV VASIIE