Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2279 |
Symbol | |
ID | 3909660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2627788 |
End bp | 2628735 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637884176 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
Protein accession | YP_485895 |
Protein GI | 86749399 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.257995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.879431 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGACA AGGTTCTGGT GTTTTCGCGG TTCGCGAAGT CGATGCTGAC GCGGTTCGGC GAGCGGTTCG AACTGCTCGA GACCGGCGGC AAGCCGGCCG ACGAAGTCTT CAGCGCGACC GAACTCGCCG GCGTTCGCGC GCTGCTGACC ATGGGCGCGC AGCCGCTCGG CCGCGACACG ATGGATCTGT TGCCGTCGCT CGGCGCGATC GTCTGCTACG GCACCGGCTA TGACGGAGTC GACCTCGACG CCGCCGCCGA ACGCAACATC CTGATCGGCA ACTCGCCGGC GGCGAATGCC TCGGCGGTCG CCGATCTGGC GATGACGCTG CTGCTCGGGC TGATGCGACG GGTGATTCCG GCGGACGCTT ACTTACGCAG CGGCGGCTGG TCGGGAGCGA GGCCGTCGCC GCTGCTCAAG CCACCGCGCG GCCTGACCGG CGCCAAAGTC GGCGTCTACG GCATGGGCGA GATCGGCCGC AAGATCGCGG CGCGGGTGGC GTCGTTCGAG ACCGAGGTCG CCTATCACAG CCGCAGCCGT CACGACGTGC CGTATCGCTA TGTCGGGAGC TTAAGCGAAC TGGTCGACTG GTGCGACGTG CTGCTGATCG CGGTCCGCGC CGGCCCGGAT ACGCAGCGCA TCATCGATGC GGAGATGTTG AAGCGGCTCG GCAAGGACGG CGTGGTGGTC AACATCTCGC GCGGCTCGGT GATCGACCAG CCGGCGCTGA TCGCGGCACT GGCCGACAAC ACCATCGCCG GCGCCGGGCT CGACGTGTTC GAACAGGAGC CTTACGTGCC GGATGCGCTC AGCGAGTTCC CGCACGTGGT GCTGACGCCG CATATCGGCG GTCACACCCT CGATGCGCAT GTCGCGATGC AGGATTGCGT GATCGCCAAC CTCACAGCTT ACTTTGCAGG CAGGCCGCTG CCTTATCCGG TGGCGTAG
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Protein sequence | MTDKVLVFSR FAKSMLTRFG ERFELLETGG KPADEVFSAT ELAGVRALLT MGAQPLGRDT MDLLPSLGAI VCYGTGYDGV DLDAAAERNI LIGNSPAANA SAVADLAMTL LLGLMRRVIP ADAYLRSGGW SGARPSPLLK PPRGLTGAKV GVYGMGEIGR KIAARVASFE TEVAYHSRSR HDVPYRYVGS LSELVDWCDV LLIAVRAGPD TQRIIDAEML KRLGKDGVVV NISRGSVIDQ PALIAALADN TIAGAGLDVF EQEPYVPDAL SEFPHVVLTP HIGGHTLDAH VAMQDCVIAN LTAYFAGRPL PYPVA
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