Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2249 |
Symbol | |
ID | 3909032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2594943 |
End bp | 2596109 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637884144 |
Product | peptidase S1 and S6, chymotrypsin/Hap |
Protein accession | YP_485865 |
Protein GI | 86749369 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.637254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCCAT CCGTCCCGCC GACCAGGCCT CCGCCCGATC CGCAGATCCG CCGGGCGCAG CGCACTGACC TGCTGCTCCG AGCCGCCGTG ATCTGGCTGT TGTTGCTGGC AACGGCCTGG GTCGCGCAGC CTTATCTCTC GTCGTTGTGG TTCTCGGTGT CCGGGCCCCG GACCGTCACC GCCCGGGGTG ATCTGGCCCC GGCGGAGACC GCGACCATCG AGCTGTTCAA ACGGGTGTCG CCGTCGGTGG TGCACGTCTT TGCCCAGTCG AGCCGGCGCT CGCCGTCGCT GTTCGAGCAG CAACAGGAGG GCGGGGTGCA GTCCGGCTCC GGTGTGATCT GGGACGCCGC GGGCCACGTC ATCACCAACA ACCACGTCAT CCAGGGCGCA ACTGCACTGG GCGCGCGGCT GTCGACCGGC GAGTTCGTCA CCGCGCGCGT GGTCGGCACC GCGCCGAACT ACGACCTCGC GGTGCTGCAG CTCGAGCGAC CGCGCGCCGA GCTGCGCCCG ATTGCGATCG GCAGTTCGTC GGACCTGCAG GTCGGGCAGT CGGCGTTCGC CATCGGCAGC CCCTATGGTC TGGAGCAGAC GCTGACCACC GGCATCGTCA GCGCGCTGCA GCGGCGGCTA CCGACCGCGG CTGCCCATGA AGTCAGTGGC GTGATCCAGA CCGATGCGGC GATCAATCCC GGCAATTCGG GCGGCCCCTT GCTCGACAGC GCCGGCCGCT TGATCGGCTT GAACACCGCA ATCATTTCCG GATCGGGCGC TTCGGCCGGA ATCGGCTTCG CGATCCCGGT CGATTCCGTC AATCGGATCG CCACCGCGCT GATCAAGACC GGCACCGTGC CGGTGCCCGG CATCGGCATC ATCGCCGCCG ACGAGAACGA GGCCGCCCGC CTCGGCATCG ACGGCGTCGT CGTCGTGCGT ACGCTGCCGG GCTCCCCGGC GGCACGCGCG GGGCTCACCG GCGCCAGCGA GACCGGCATG GTCGAGGACG TCATCGTCGG TGCCAACGGC CAGGAGATCC ACAGCATGTC GGATCTCGCC GCGACGCTCG AACGCGTCGG CATCGGCAAC GAGGTCAAGC TGCAGGTGAT TCGCGACGGC CGCGCCCGGA CCATCAACGT CGAGGTCACC GATATTGCCC GATTGCGGCG CAGCTAG
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Protein sequence | MPPSVPPTRP PPDPQIRRAQ RTDLLLRAAV IWLLLLATAW VAQPYLSSLW FSVSGPRTVT ARGDLAPAET ATIELFKRVS PSVVHVFAQS SRRSPSLFEQ QQEGGVQSGS GVIWDAAGHV ITNNHVIQGA TALGARLSTG EFVTARVVGT APNYDLAVLQ LERPRAELRP IAIGSSSDLQ VGQSAFAIGS PYGLEQTLTT GIVSALQRRL PTAAAHEVSG VIQTDAAINP GNSGGPLLDS AGRLIGLNTA IISGSGASAG IGFAIPVDSV NRIATALIKT GTVPVPGIGI IAADENEAAR LGIDGVVVVR TLPGSPAARA GLTGASETGM VEDVIVGANG QEIHSMSDLA ATLERVGIGN EVKLQVIRDG RARTINVEVT DIARLRRS
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