| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2168 |
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| Symbol | thrS |
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| ID | 3909948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2460020 |
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| End bp | 2462005 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637884062 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_485785 |
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| Protein GI | 86749289 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.762302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0294607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCCG AACAGGTCAC CGTGACCTTC CCGGACGGCA AGACCCGCGA CTATCCGCGC
GGCACCACCG GGCTCGACAT CGCCAAGGGA ATTTCGCCGT CGCTGGCCAA GCGCACCGTG
GCGATGGCGC TGAACGGCGT GCTGACCGAC CTCGCCGATC CGATCGAGGA AAACGCCGCG
ATCGATTTCG TCGCCCGCGA CGATGCCCGC GCGCTGGAGC TGATCCGGCA CGATTGCGCC
CATGTGCTGG CCGAAGCGGT GCAGAGCCTG TGGCCGGGCA CCCAGGTGAC GATCGGCCCG
ACCATCGAGA ACGGGTTCTA CTACGACTTC TTCCGCAACG AGCCGTTCAC GCCTGAGGAT
TTCGGCGCGA TCGAGAAGAA GATGCGCGAG ATCATCCAGC GCGACAAACC CTTCACCAAG
GAAATCTGGA GCCGCGACGA GACCAAGAAG GTGTTCGCCG ACAATGGCGA GATGTTCAAG
GTCGAGCTGG TGGATGCGAT CCCCGCCGAC CAGACCATCA AGATCTACAA GCAGGGCGAC
TGGTTCGACC TGTGCCGCGG CCCGCACATG ACCTCGACCG GCAAGATCGG CACCGCCTTC
AAGCTGATGA AGGTGGCCGG CGCGTATTGG CGCGGCGACA GCAACAACCC GATGCTGACC
CGGATCTACG GCACCGCCTT CGCCAAGCAG GACGACCTCG ACGCGTATCT GAAGCAGATC
GAGGAAGCCG AGAAGCGCGA CCACCGCAAG CTCGGCCGCG AACTCGACCT GTTCCACTTC
CAGGAGGAAG GCCCCGGCGT GGTGTTCTGG CATGCCAAGG GCTGGAGCAT CTTCCAGTCG
CTGGTCGGCT ATATGCGCCG CCGCCTCGCC GGCGACTACG ACGAGGTCAA CGCGCCGCAG
ATCCTCGACA AGGTGCTGTG GGAGACCTCC GGGCACTGGG AGTGGTACCG CGAGAACATG
TTCGCGGCGC AATCCGCCGG CGAGGACGCC GAGGACAAGC GCTGGTTCGC GCTGAAGCCG
ATGAACTGCC CGGGCCACGT CCAGATCTTC AAGCACGGCC TGAAGAGCTA TCGCGACCTG
CCGCTGCGCA TGGCCGAATT CGGCGTGGTG CATCGCTACG AGCCGTCCGG CGCGATGCAT
GGGCTGATGC GGGTGCGCGG CTTCACCCAG GACGACGCCC ATGTGTTCTG CACCGAGGCG
CAGCTCGCCG ACGAGTGCAT GAAGATCAAC GACCTGATCA TGTCGACCTA CTCCGACTTC
GGCTTCGACG GCGAACTCAC CGTCAAGCTC TCGACCCGGC CGGACAAGCG CGTCGGCACC
GACGAGATGT GGGATCACGC CGAGCGGGTG ATGGCCACCG TGCTCAGCGA GATCAAGGCG
CAGGGTAGTA ACCGGATCAA GACCGAGATC AATCCGGGCG AAGGCGCGTT CTACGGGCCG
AAATTCGAAT ACGTGCTGCG CGACGCGATC GGCCGCGACT GGCAATGCGG CACCACGCAG
GTCGACTTCA ACCTGCCGGA ACGCTTCGGC GCGTTCTACA TCGACGCCGA CGGCGCCAAG
AAGGCGCCGG TGATGGTGCA CCGCGCAATC TGCGGCTCGA TGGAGCGCTT CATCGGCATC
CTGATCGAGC ACTTCGCCGG CAATTTCCCG CTGTGGCTGG CGCCGGTGCA GCTGGTGGTC
GCGACCATTA CTTCCGAGGG CGATGAGTAC GCCAAGCAGG TGGTCGCCGC GGCGCGGCGC
GCGGGACTAC GCGTCGACAT CGATTTGCGC AACGAGAAGA TCAACCTCAA GGTGCGCGAG
CATTCGCTGG CCAAGGTCCC GGCGCTGCTC GTCGTCGGCA AGAAGGAAGC CGAGACGCAT
TCGGTCTCGG TGCGACGGCT CGGCAGCGAC GGCCAGACGG TGATGCCGAC CGCCGAGGCG
ATCGCCGCTT TGGTGGACGA AGCGACGCCG CCGGACGTGC GGCGGATGCG AGCGCAGGCG
GCGTGA
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| Protein sequence | MSAEQVTVTF PDGKTRDYPR GTTGLDIAKG ISPSLAKRTV AMALNGVLTD LADPIEENAA
IDFVARDDAR ALELIRHDCA HVLAEAVQSL WPGTQVTIGP TIENGFYYDF FRNEPFTPED
FGAIEKKMRE IIQRDKPFTK EIWSRDETKK VFADNGEMFK VELVDAIPAD QTIKIYKQGD
WFDLCRGPHM TSTGKIGTAF KLMKVAGAYW RGDSNNPMLT RIYGTAFAKQ DDLDAYLKQI
EEAEKRDHRK LGRELDLFHF QEEGPGVVFW HAKGWSIFQS LVGYMRRRLA GDYDEVNAPQ
ILDKVLWETS GHWEWYRENM FAAQSAGEDA EDKRWFALKP MNCPGHVQIF KHGLKSYRDL
PLRMAEFGVV HRYEPSGAMH GLMRVRGFTQ DDAHVFCTEA QLADECMKIN DLIMSTYSDF
GFDGELTVKL STRPDKRVGT DEMWDHAERV MATVLSEIKA QGSNRIKTEI NPGEGAFYGP
KFEYVLRDAI GRDWQCGTTQ VDFNLPERFG AFYIDADGAK KAPVMVHRAI CGSMERFIGI
LIEHFAGNFP LWLAPVQLVV ATITSEGDEY AKQVVAAARR AGLRVDIDLR NEKINLKVRE
HSLAKVPALL VVGKKEAETH SVSVRRLGSD GQTVMPTAEA IAALVDEATP PDVRRMRAQA
A
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