| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2100 |
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| Symbol | |
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| ID | 3908514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2387545 |
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| End bp | 2388531 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883993 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_485717 |
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| Protein GI | 86749221 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.415706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000106106 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGCACATCC TCATCCTCGG CGCCGCCGGC ATGGTCGGGC GCAAACTCAC GGAGCGGCTG
CTCGCCGACG GTCGCCTCGG TGATCGCGAG ATCACCCGGA TGACGCTGCA GGACGTGGTC
GCGCCGGCCA CGCCCGCCAA GGCGGCGATG CCGATCACGA CGATCGTCAG CGATCTCGCC
GAGCCGGGGC AGGCGGCGGC GCTGGTGGCG CATCGGCCGG AGGTGATCTT CCATCTCGCC
GCGATCGTCT CCGGCGAGGC CGAGGCCGAT TTCGACAAGG GCTACCGCAT CAATCTCGAC
GGCACGAGGC ATCTGATCGA CGCGATCCGC GCGGAAGGCG ACGACTATCA TCCGCGGCTG
GTGTTCACCT CGTCGATCGC GGTGTTCGGC GCGCCGTTCC CCGAGAAAAT CGGCGACGAA
TTCCTCTCCG CGCCGCTCAC CAGCTACGGC ACCCAGAAGG CGATCTGCGA ACTCTTGATC
GCCGACTATA CCCGCAAGGG CTTTCTCGAC GGCGTCGGCA TTCGCCTGCC GACGATCTGC
GTCCGCCCCG GCACGCCCAA CAAGGCGGCC TCCGGCTTCT TCTCCAACAT CATCCGCGAG
CCGCTCGCCG GCCACGAGGC GGTGCTGCCG GTCTCCGACG ACGTGATGCA CTGGCACGCC
TCGCCGCGCT CCGCGGTCAG CTTCCTGATC CATGCCGGCA CGATGGACAC GCAGGCGATC
GGCCCGCGCC GCAATTTGTC GATGCCCGGT CTCGCCGCCA CCGTCGGCGA ACAGATCGCG
GCGCTCGAAC GCGTCGCCGG CAAGGGCGTC GTGGCGCGGA TCAGGCGCGA GCCCGATCCG
GTGATCATGG GCATCGTCGC CGGCTGGCCG CGCAATTTTG CGACCGACCG CGCGCTCGCG
CTCGGCTTCA CCACCGCGGA ACAGAGCTTC GACGACATCA TCCGGATTCA CATCGAGGAC
GAACTGGGCG GGAATTTTGC CGCCTGA
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| Protein sequence | MHILILGAAG MVGRKLTERL LADGRLGDRE ITRMTLQDVV APATPAKAAM PITTIVSDLA
EPGQAAALVA HRPEVIFHLA AIVSGEAEAD FDKGYRINLD GTRHLIDAIR AEGDDYHPRL
VFTSSIAVFG APFPEKIGDE FLSAPLTSYG TQKAICELLI ADYTRKGFLD GVGIRLPTIC
VRPGTPNKAA SGFFSNIIRE PLAGHEAVLP VSDDVMHWHA SPRSAVSFLI HAGTMDTQAI
GPRRNLSMPG LAATVGEQIA ALERVAGKGV VARIRREPDP VIMGIVAGWP RNFATDRALA
LGFTTAEQSF DDIIRIHIED ELGGNFAA
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