| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2083 |
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| Symbol | |
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| ID | 3908496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2366831 |
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| End bp | 2369329 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637883975 |
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| Product | inner-membrane translocator ABC transporter |
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| Protein accession | YP_485700 |
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| Protein GI | 86749204 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.27241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTTC CGACGAAATT GCGCAGCTAC GCGATGCCGG CGACAGTGCT GATCCTCACC
GCGATCGCCG CGCTCTACGC CGCGCGGGCG GAAGGCTATT TGCCGTTCGT GCTGGCGATG
GTGGCGCTCA CCTGCATCGT AGGCGTCGGT CTCAATGTGC TGGTCGGGCT CACCGGGCAG
ATCTCGATCG GCCATGTCGG CTTCTACGCG ATCGGCGCCT ATACGGTGGC GATCCTGACC
CTGCAGGGAC TGAGTTTCTG GCTGGCGCTG CCGCTTGCGG GCGTGATCGC CGGCGCCATT
GGTCTGCTGC TGTCGCTGCC GGCGCTGCGC GTCAGCGGGC CTTATCTCGC GATGATCACC
ATCGCCTTCG CCTTCATCGT TCAGCATCTC ACCATCGAAT GGCGCGGCCT CACCGGCGGC
TCCAACGGCC TGATGGGGCT GCCGCCGCCG ACGCTGGCCG GCACCATGTT CACCGAGCGC
GAGATCGCCC TGCTGGCGAT CGGGCTGGCC GGTGCTTCGA CCTATCTGTT CTATCGGCTC
GCCGGCTCGG CCTGGGGCAA GGCGATGGTC GCGGTGCGCG ACGCCGAGAT CGCGGCACGC
TCGATCGGGC TCAATCCGGT CAGCGTCAAG GCGGCGGCGT TCGTGCTGTC GGCGGCGCTG
GCGGGCATCG CCGGTGGCAT CTTCGCGGCG CTGATCGCCT TCGTCGCGCC GGACTCGTTT
CCGTTCTCGC AGTCGATCCT GTTCCTGTTC GCCTGCATCG TCGGCGGCGC CGGATGGGTG
CTCGGCCCGG TGGTCGGCGC CGCCATCACC GTGGTGCTGC CGGAGATGCT GTCGCAACTC
GCCGAATATC GGCTGCTGTT CTTCGGGCTG CTGCTGCTGC TGGTGCTGTG GCTGGCGCCG
GAGGGTATCC TCGGCACGCT GGCGCGGCTG GTGCGCCGGA TCGATCCGCG GCCGGCGCAG
CCCGGCGATG TCGCCGCGTT TCTCGCCGCG TCGCCCGAGC GCGGCGCGCT CGAGGTGAGC
GGCATCGGCA TCAGCTTCGG CGGCATCCGC GCGGCCTCGC AGGTGTCGTT CATCGCCGAG
CCCGGCATGG TCACCAGCGT GATCGGCCCG AACGGCGCCG GCAAGACCAC CGTGCTCAAC
ATGATCGGCG GCTTCTACAA GCCCGACGCC GGCAGCATCC GGCTTGGCGG GCAGGAACTC
GCCGGCGAGC CGGCGTGGAA GGTGGCGCGC GCCGGCATCG GCCGCACCTA TCAGACCACC
AAGCTGTTCG AGACCATGAG CGTGCGCGAC AACGTGCTGA TCGCGATGCG CCGCGGCCGG
CTCGGCTCGA TGCTGGCCTT CGCCGCCAAC GACGCCGACG AGGCCGCGGC CGAAGCGCTG
ATCGATTTCG TCGGCTATCG CGGCGCGCTG GCCGCGGTCG CCGGCGATCT GCCGCATGTC
GATCGCCGGC TGGTCGAGAT CGCCCGCGCG CTGGCGATGC GGCCGCGCGT GCTGCTGCTC
GACGAGCCCG CCGCCGGGCT GATGGCGGCC GACAAGGACG CGCTGAGCGG CCTGCTGCGC
CGGATCGCCG ATCTCGGAAT CGCCGTCATT CTGGTCGAGC ACGACATGCG GCTGGTGATG
GGGATTTCCG ACCACGTCGT GGTGCTCGAC GCCGGCACGC CGATCGCGGC CGGCACCGCC
AACGTCATCC GCCGCGATCC GAAGGTGCTG GCCGCCTATC TCGGCGGCGC CGAAATGCGC
GCGCGCGGCC GCGAGACGCC GTGGGACGGC TCGCGCGACG CGGTGCTGGA CGTGATCGAT
CTGGTCGCCG GTTATGGCGC CGCGCCGGTG CTGCAAAAGG TCAATCTGCA AGTGCGGCCC
GGCGAGATGG TGGCGCTGAT CGGCGCCAAT GGCGCCGGCA AATCGACCAT GATGCGCGCG
CTCTCCGGCC TGCTGCGCCC GGTGCAGGGC GACGTCATTC TCGACGACGA ACGCATCGAG
ACGATCGAGG CGCATCGTAT CGCCGCGCGC GGCCTCGCGC TGGTGCCGGA AGGCCGCCAG
GTGTTTCCCG AACTCAGCGT CTACGACAAT CTCGAACTCG GCGCCAACAC GCGGACCAAC
GTCGACTACG CCGCCGAGAT CGAAGCCGTG CTGAAGCGGT TTCCGCGGCT GCGCGAACGG
CTGAACAGCC GGGCAGGGCT GTTGTCCGGC GGCGAGCAGC AGATGCTGGC GATCGCGCGC
GGCATGATGG CGAAGCCGCG CATCCTGCTG CTCGACGAGC CGTCGCTGGG GCTTGCGCCC
GCAATGATCA ACGAACTTTA CGACGTGCTC GCCGATCTGC GCGACGAGGG CATCACCATC
CTCCTGGTCG ACCAGATCGC CGTGCTGGCG CTGGCGGTGT CCGACCGCGG CTATGTGATC
GACAGCGGCC GCATCGTCCG CGACGACAGC GCCGCGGCGC TCGCCAGCGA TCCCGAGGTC
GAGGCCGCTT ATCTCGGCCA TGCCGAAGCT GCGCAGTGA
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| Protein sequence | MTLPTKLRSY AMPATVLILT AIAALYAARA EGYLPFVLAM VALTCIVGVG LNVLVGLTGQ
ISIGHVGFYA IGAYTVAILT LQGLSFWLAL PLAGVIAGAI GLLLSLPALR VSGPYLAMIT
IAFAFIVQHL TIEWRGLTGG SNGLMGLPPP TLAGTMFTER EIALLAIGLA GASTYLFYRL
AGSAWGKAMV AVRDAEIAAR SIGLNPVSVK AAAFVLSAAL AGIAGGIFAA LIAFVAPDSF
PFSQSILFLF ACIVGGAGWV LGPVVGAAIT VVLPEMLSQL AEYRLLFFGL LLLLVLWLAP
EGILGTLARL VRRIDPRPAQ PGDVAAFLAA SPERGALEVS GIGISFGGIR AASQVSFIAE
PGMVTSVIGP NGAGKTTVLN MIGGFYKPDA GSIRLGGQEL AGEPAWKVAR AGIGRTYQTT
KLFETMSVRD NVLIAMRRGR LGSMLAFAAN DADEAAAEAL IDFVGYRGAL AAVAGDLPHV
DRRLVEIARA LAMRPRVLLL DEPAAGLMAA DKDALSGLLR RIADLGIAVI LVEHDMRLVM
GISDHVVVLD AGTPIAAGTA NVIRRDPKVL AAYLGGAEMR ARGRETPWDG SRDAVLDVID
LVAGYGAAPV LQKVNLQVRP GEMVALIGAN GAGKSTMMRA LSGLLRPVQG DVILDDERIE
TIEAHRIAAR GLALVPEGRQ VFPELSVYDN LELGANTRTN VDYAAEIEAV LKRFPRLRER
LNSRAGLLSG GEQQMLAIAR GMMAKPRILL LDEPSLGLAP AMINELYDVL ADLRDEGITI
LLVDQIAVLA LAVSDRGYVI DSGRIVRDDS AAALASDPEV EAAYLGHAEA AQ
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