| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2054 |
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| Symbol | |
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| ID | 3909869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2335842 |
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| End bp | 2337230 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637883947 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_485672 |
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| Protein GI | 86749176 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.568287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACGT TCGACAATCC GTTCGATCCC AACCGTCGCC TCACCGCAGG CGGATGTAGC
TGCGGCCGGC ACGTCAACGA AGCCGAACAT GCGGCGGATC CGTCGTCGGC GCTGCAGCCG
ACAATGCTGG AGAGCGACGA CAAGAAGTTC GAGGGCGTGG TCGCCTCCGC GGTGATGCGG
GCGATGTTTC CGCAAGACGC CTCGCGGCGC GCCTTTCTGA AATCGGTCGG CGCCGCAACC
GCTCTGGCGG CGATCTCGCA GTTCTTTCCG CTACAGACCG CCACCGAGGC GTTCGCCTCC
GGCGGTCCGC TGGAGAAGAA GGACCTCAAG GTCGGCTTCA TCCCGATCAC CTGCGCCACG
CCGATCATCA TGGCCGCCCC GATGGGGTTC TATTCGAAAT ACAGCCTCAA CGTCGAAGTC
ATCAAGACCG CGGGTTGGGC GGTGATCCGC GACAAGACCA TCAACAAGGA ATACGACGCC
GCGCACATGC TGTCGCCGAT GCCGCTCGCC ATCACCATGG GCGTCGGCTC GAATCCGATC
CCCTACACCA TGCCGGCGGT CGAGAACATC AACGGCCAGG CCATCACTTT GGCGATGAAG
CACAAGGACA AGCGCAATCC GAAGGATTGG AAGGGATTCA AATTCGCGGT CCCGTTCGAC
TATTCGATGC ACAACTATCT GCTGCGCTAT TATCTCGCCG AACACGGCCT CGATCCCGAC
GTCGACGTGC AGATCCGCGC GGTGCCGCCG CCGGAAATGG TCGCCAATCT GCGCGCCGAC
AATATCGACG GCTATCTCGC GCCCGACCCG ATGAACCAGC GCGCGGTGTA TGACGGCGTC
GGCTTTATCC ACATCCTGAC CAAGGAGATC TGGGACGGCC ACCCGTGCTG CGCCTTCGCC
GCGTCGAAGG AATTCGTCAC CACGATGCCC AACACCTACG GCGCGCTCTT GAAATCGATC
ATCGAGGCCA CCGCCTACGC CCACAAGCCG GAGAACCGCA AGGAGATCGC CGCCGCGATC
GCGCCGGCCA ACTACCTGAA CCAGCCCGCG ATCGTGCTGG AGCAGATCCT CACCGGCACC
TATGCGGACG GCCTCGGCAA CATCATCAAG CAGCCGAACC GGATCGACTT CGACCCGTTC
CCCTGGCAGT CCTTCGCGGT CTGGATCATG ACCCAGATGA AGCGCTGGGG ACAGGTCAAG
GGCGACGTCG ACTACAAGGC GATCGCCGAG CAGGTCTATC TGGCGACCGA CACCGCGAAA
CTGATGAAGG AAGCGGGCCT CACCCCGCCG ACCACGACCT CGCGGTCGTT CTCGGTGATG
GGCAAGTCGT TCGACGGCTC GAATCCGGAA GAATATCTCG CGAGCTTCAA GATCAAGAAG
GCCTCGTGA
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| Protein sequence | MSTFDNPFDP NRRLTAGGCS CGRHVNEAEH AADPSSALQP TMLESDDKKF EGVVASAVMR
AMFPQDASRR AFLKSVGAAT ALAAISQFFP LQTATEAFAS GGPLEKKDLK VGFIPITCAT
PIIMAAPMGF YSKYSLNVEV IKTAGWAVIR DKTINKEYDA AHMLSPMPLA ITMGVGSNPI
PYTMPAVENI NGQAITLAMK HKDKRNPKDW KGFKFAVPFD YSMHNYLLRY YLAEHGLDPD
VDVQIRAVPP PEMVANLRAD NIDGYLAPDP MNQRAVYDGV GFIHILTKEI WDGHPCCAFA
ASKEFVTTMP NTYGALLKSI IEATAYAHKP ENRKEIAAAI APANYLNQPA IVLEQILTGT
YADGLGNIIK QPNRIDFDPF PWQSFAVWIM TQMKRWGQVK GDVDYKAIAE QVYLATDTAK
LMKEAGLTPP TTTSRSFSVM GKSFDGSNPE EYLASFKIKK AS
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