Gene RPB_2042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2042 
Symbol 
ID3909857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2321839 
End bp2322495 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content71% 
IMG OID637883935 
Producthypothetical protein 
Protein accessionYP_485660 
Protein GI86749164 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGG CCGGCCGATC TGCGCTCGCC ATCGACTTCG TCGGCGGCGC GGTCGGTTAC 
AAATTGCGCT CCGGCGCCGC CCGCAGCCAC GCGCTGCTGA AGGCGACCGG CATGGCGCCC
GGCCGCGCGC TGCAGGTCAT CGATGCCACC GCAGGACTCG GCCGCGATGC CTTCCTGCTC
GCGTCGATGG GCGCGAGCGT CACGTTGATC GAGCGGTCGC CGCAGGTGCA CGCGCTGCTC
GCGCAAGGGC TCGCCGCGGC GCAGGCGGAG AGCGCCGAGC TCGCCGGCGT CGTCGCCCGG
ATGACTCTGA TCCAGGGCGA TGCGCGCGAC CTGCTTCCGA CCCTGCAGGC CGATGTCGTG
ACCGTCGATC CGATGCATCC GGAGCGGACC AAGACGGCAT TGGTCAAGCA GGAGATGCGG
CTGCTGCGCG ATCTGGTCGG CGCCGATCCC GACGTTTGCG AATTGATGCA GGCGGCGCTG
TCGGCGCGCT GCGGCCGGGT CGTGCTGAAA TGGCCGTTGC GTGCCGAGCC GCTCGCCGGC
GTGCGCAAGC CGTCCTACCA GATCGCCGGC AAGACGGTGC GCTACGACGT GTTCGTGCTG
CCGCGCGGTG CTGCGGAAGA GCGCGCGCCC GGCGCCGATG CCGCGCTCAA TCCTTGA
 
Protein sequence
MAAAGRSALA IDFVGGAVGY KLRSGAARSH ALLKATGMAP GRALQVIDAT AGLGRDAFLL 
ASMGASVTLI ERSPQVHALL AQGLAAAQAE SAELAGVVAR MTLIQGDARD LLPTLQADVV
TVDPMHPERT KTALVKQEMR LLRDLVGADP DVCELMQAAL SARCGRVVLK WPLRAEPLAG
VRKPSYQIAG KTVRYDVFVL PRGAAEERAP GADAALNP