Gene RPB_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2016 
Symbol 
ID3909522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2295672 
End bp2296433 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content68% 
IMG OID637883910 
ProductErfK/YbiS/YcfS/YnhG 
Protein accessionYP_485635 
Protein GI86749139 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.382992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCGT ATCTCGTTTC CCTCGCCGGC CTGATCCTGC TGGCGACCGC CGGCACCGCG 
CAGGCGAAAG TCGCGATCAC CGTCGACAAG GACAATCAGC AAATGACCGT CGCGGTCGAT
GGCGTCGAGC GCTATCGCTG GCCGGTCTCG ACCGGAAACC CGTCGCACGA AACGCCGAAC
GGATCGTTCC AAACCTTCCG GATGGAGCCC GATCATTATT CGAAGGAGTT CGACGATGCG
CCGATGCCGC ACGCGATCTT CTTCACCAAG CGCGGCCACG CCATCCACGG CACCGACGCC
GCCGGCAAGC TCGGCGTGCC GGTGTCGCAC GGCTGCGTGC GACTGTCGCG CGAGAACGCG
TCGAAGCTCT ATGCGCTGGT CGAGAAGGAC GGCGTGCTCA ACACCACCGT CACCCTCACC
GGATCGTCGC GCGTGGCGCT GGCGCGGCAG CCGGCCAACC GGACGGCCAC CGCGGCGGCG
CGCCGCGCTC CGGCGCCGGT CTATGACAGC GCCGGCGAGC CGGTCGAACT GGCGCCGCGC
GCGCAGCCAC GTGTGGTCGC GCCGCAGGTC GTGGACGACG GCTACATCTA TCCGGCCGAC
GGCAGCGACA GCCGCCGCTA CCCGGCTCCT CCCGGCTATC GCCGCGGCTA CGCCCAGCCG
CAGTATCAGC ACTCGGATGA AGACGCCTAC GCGGCCCAGG TCTATCAACC GCAGCGCTAC
TACCAGCCGC GCGGCTATTA CGGCGGCTAC TCGGCGTATT GA
 
Protein sequence
MRSYLVSLAG LILLATAGTA QAKVAITVDK DNQQMTVAVD GVERYRWPVS TGNPSHETPN 
GSFQTFRMEP DHYSKEFDDA PMPHAIFFTK RGHAIHGTDA AGKLGVPVSH GCVRLSRENA
SKLYALVEKD GVLNTTVTLT GSSRVALARQ PANRTATAAA RRAPAPVYDS AGEPVELAPR
AQPRVVAPQV VDDGYIYPAD GSDSRRYPAP PGYRRGYAQP QYQHSDEDAY AAQVYQPQRY
YQPRGYYGGY SAY