Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1989 |
Symbol | murE |
ID | 3909495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2258997 |
End bp | 2260454 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637883883 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
Protein accession | YP_485608 |
Protein GI | 86749112 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.423746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTCC GCGACCTCTT CAGCGACGAC ACGGCGATCA CGGTGCAGGC GGCCGCTCTC GATGTCGGCG GCCTCGCGGT CGACAGCCGA GCGGTGAAGC CGGGCGATGT GTTCTTTGCG CTGGCCGGGG CGAAGACCGA CGGGGCGCGC TTCGTCGCCG CTGCGATCGA GGCAGGCGCC GTCGCGGTGG CTGGCGATCA TCCGCCCGCG GGCGACCTCG CCGTGCCCTT CGTTCGCCTG ACCAATCCGC GCCGCGCGCT GGCGCTCGCC GCCGCGCGGA TGTTTCCGCA GCAGCCGCAG ACCATCGCGG CGGTCACCGG CACCAGCGGC AAGACTTCGG TGGCAGCGTT TACGAGGCAG ATCTGGCAGC GGCTGGGTCA TGCTTCGGCC AGCATCGGCA CCATCGGTCT CGTGACGCCG ACGCGCAGCG TCTACGGCTC GCTGACCACG CCGGATCCGA TCGCGCTGCA TCGCTCGCTC GACGCCATTG CGCGCGAGGG CGTCACCCAT CTGGCGCTGG AAGCTTCGTC GCACGGGCTC GACCAGTTCC GCCTCGACGG CGTCCGCGTC GCGGCGGGGG GATTCACCAA TCTGTCGCGC GACCATATGG ACTATCATCC CGACGTTGCG CACTACCTGA ACGCCAAGCT GCGGCTGTTC CGCGATCTCG TGGTCGACGG CGGCGCCGCG GTGATCTCGG CCGATCACGA CTGTTCGGCG GAAGTGATCG ATGCGGCTCG GGCGCGCGGG TTGCGGCTGA TCAGCGTCGG CCGCAACGGC GACGCCGGCG CGGGCATCCG GCTGATCGCG GCCGCGGTCG ACGGCTTCGC GCAGCGGCTC ACGCTCGACC ATGCCGGGCG TAACTATCAA GTCCACCTGC CGCTGGTCGG CGAATTCCAG ATCGAGAATG CGCTGGTCGC GGCCGGGCTG GTGATCGGCA CCGGCGGCGA TCCGGCGGCG GTGTTTGCCG CGCTCGATCA TCTCGAGGGC GCGCCCGGCC GGCTGGAGCT GGTCGGCGAA CGCAACGGCG CGCCGGTGTT CGTCGACTAT GCGCACAAGC CAGATGCTCT GGCCAAGTCG CTGCAGGCGC TGCGGCCTTA TGCCAAGCGC AAGCTCGTTG TGGTGTTCGG CGCCGGCGGC GATCGCGACG CCGGCAAGCG GCCGCTGATG GGCGCGATCG CGGCCGAGAG CGCCGACGCC GTGATCGTCA CCGACGACAA TCCGCGCCGC GAAGACCCCG CCACGATCCG CGCCGCGATT CTCGCAGCAG CGCCGGGCGC GCGCGAGATC GGCGACCGGG CCGAGGCGAT CCGAACAGCG ATCGGCGAAT TGCAGCCGGG CGACGCGCTG GTGATCGCCG GCAAGGGCCA TGAAACCGGG CAGATCGTGG GCGACACGGT GCTGCCTTTC AGTGACCACG AAGCCGCCGC GGCGGCGTTG TCAGCGAGCG CCGCATGA
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Protein sequence | MKLRDLFSDD TAITVQAAAL DVGGLAVDSR AVKPGDVFFA LAGAKTDGAR FVAAAIEAGA VAVAGDHPPA GDLAVPFVRL TNPRRALALA AARMFPQQPQ TIAAVTGTSG KTSVAAFTRQ IWQRLGHASA SIGTIGLVTP TRSVYGSLTT PDPIALHRSL DAIAREGVTH LALEASSHGL DQFRLDGVRV AAGGFTNLSR DHMDYHPDVA HYLNAKLRLF RDLVVDGGAA VISADHDCSA EVIDAARARG LRLISVGRNG DAGAGIRLIA AAVDGFAQRL TLDHAGRNYQ VHLPLVGEFQ IENALVAAGL VIGTGGDPAA VFAALDHLEG APGRLELVGE RNGAPVFVDY AHKPDALAKS LQALRPYAKR KLVVVFGAGG DRDAGKRPLM GAIAAESADA VIVTDDNPRR EDPATIRAAI LAAAPGAREI GDRAEAIRTA IGELQPGDAL VIAGKGHETG QIVGDTVLPF SDHEAAAAAL SASAA
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