Gene RPB_1936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1936 
Symbol 
ID3908015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2205628 
End bp2205894 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content67% 
IMG OID637883830 
Producthypothetical protein 
Protein accessionYP_485555 
Protein GI86749059 
COG category[S] Function unknown 
COG ID[COG5552] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.208549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCGGA ATATCAAGAC GCTGTTCAAC TTCGAGCCGC CGGCGACCGA GGATGAAATC 
CGCGCCTCGG CGCTGCAATT CGTCCGCAAG CTGTCGGGGT TCAACACGCC GTCGCAGGCC
AACGCAGCGG CGTTCGCGCG CGCGGTCGAC GACGTCGCCG ATGTCGCGCG GACGTTACTG
GCGTCGCTGC AGACGCAGGC CGAGCCGCGC AACCGGGACG TCGAGGCAGA GAAGGCAAGA
GAGCGCTCGC GCGCGCGATT CGGTTAG
 
Protein sequence
MCRNIKTLFN FEPPATEDEI RASALQFVRK LSGFNTPSQA NAAAFARAVD DVADVARTLL 
ASLQTQAEPR NRDVEAEKAR ERSRARFG