| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1935 |
|---|
| Symbol | |
|---|
| ID | 3908014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 2204855 |
|---|
| End bp | 2205481 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637883829 |
|---|
| Product | SOUL heme-binding protein |
|---|
| Protein accession | YP_485554 |
|---|
| Protein GI | 86749058 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.37323 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGCGA TTTGGTACTA CACCGTGCTG GTGTTCGAAT CCGTGATCGG CGTGTTCGGG
CTGCGGATCT ACGAACAACC GCCCTATACG GTGCTCGACC GCCCCGCCGA CGCCGTCGAA
ATCCGCCGCT ATGCGCCGCG CGTCGCCGCC GAGGTCGCGC TCGATCGCGA GGACCGCGCC
GACGGCCAGG CCTTCAGGCT ACTGTTCAAC TACATCGCCG GCGCCAATCG CAACGCGTCG
GGACAATCGG AGCGCGTCGC CATGACGACG CCGGTCGATG TCGCGCGGTC CGAGAAAATC
GCGATGACCG CGCCGGTGCA GACCGAGCGC AACAACGGCG CCGTCCGGAT GCGGTTCTTC
CTGCCGGCGA CGCTCACGCC CGATACCGCG CCGACGCCGG CCGACGACCG GGTCAGGATC
GTCACCGTGC CCGAGGAAAC GATCGCGACG CTGCGCTTCA CCTGGACCGG CCGCGACCTC
GCCGAACGTC AGCGGCAACT GATCGCGGCG CTGGACCATT CGCGATGGCA GCCCGCCGGC
GCGCCCTACG GCCTGTTCTA CGACGCCCCC TTCACGATTC CCTTTCTGCG CCGCAACGAA
GCCGCGGTGA CGGTGACGGC GCGATGA
|
|---|
| Protein sequence | MSAIWYYTVL VFESVIGVFG LRIYEQPPYT VLDRPADAVE IRRYAPRVAA EVALDREDRA
DGQAFRLLFN YIAGANRNAS GQSERVAMTT PVDVARSEKI AMTAPVQTER NNGAVRMRFF
LPATLTPDTA PTPADDRVRI VTVPEETIAT LRFTWTGRDL AERQRQLIAA LDHSRWQPAG
APYGLFYDAP FTIPFLRRNE AAVTVTAR
|
|---|
| |