Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1917 |
Symbol | |
ID | 3907996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2190834 |
End bp | 2192054 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637883811 |
Product | ErfK/YbiS/YcfS/YnhG |
Protein accession | YP_485536 |
Protein GI | 86749040 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.453265 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAACA ATCGAATCTT GACGTTGTTG GCGACGGTTG CGGCGATCTC GGCCGGAACG TCGGTGGTGC ACGCGCAAAA CTATCCGTCT GCGCCCGGAT CCTATGTAAC GCCGGCGCCG GGCGATTATC GCCAGGAGAT GCCGAATTTT GACAATGTCG ACGACGAGGA TGGCATCGGA TCCTCTGCGG CGCTGCCGCC GCCGGGTTTG GTGACCTCGC CGGACGATCC GCGCTACGGA CGTCCCTCGA GCGCGCCGGT CTATTCCGAT CGCGCTCCCG TGCCGCAGGG CCCGGTGATG TCGCCGGACG ACCCGCGCTA TGGTCGCCCG ATGGGCGCCC CGCCGGTCTA CTCGGAGCGC GCTCCGGTGC CCCAGGGGCC GGTGATGTCG CCCGATGATC CGCGCTACGG CCGGCCCGCC GGTCCGCCGT CGGTGATCTA CTCCAATCGC GGCGACGGTT CGCTGCGCCC GCCCGAGGGT GTTGCCGGCG CCGGACAGCC GGGCGTTCCC CAGGTCGCGA CCGGCTCGGT CCCAGCGGCT CCGCAGATCG GCGCCGACGG CCGGCCGCTT CAGGTGGCGG CGCTGCCGCC CGAGGAGCAG CCGGACGCCG ATCAAGAATT CCAGTTGCCG CAACATCTGC GCCGGCAGGA GGTTGCGTTC CCGACCAAGG AGCCGGCCGG CACCATCGTG GTCGATACCG GCAACACCTA TCTGTATTAC ATACTCGGCA ACGGCCGCGC CATGCGCTAT GGCGTCCGCG TCGGGCGCGA CGGTTTCACC TGGAACGGCG TACAGAAAGT CAGCCGCAAG GCGGAGTGGC CGGATTGGCA TCCGCCGACC GAGATGATCG AGCGCCAGCC CTATCTGCCG CGCTTCATGG CTGGCGGCCC CGGCAATCCG ATGGGCGCGC GGGCGATGTA TCTCGGCTCG ACGGTGTACC GAATCCACGG CACCAATCAG CCTTCGACCA TCGGCAAGTT CGTGTCGTCG GGCTGCATCG GCATGCTGAA CGACGACGTC AGCGACCTGT TCGAGCGCGT CAAGGTCGGC ACCCGCGTCG TCGTGTTGCC GGGCGGCGCG CCGCCCACGC CGACCGCGAG TGCCCAGTCG CCGCAGCCGG TTGCATCGGC CCAGCCGCCG CAGCAATCGC TGCAGATGTC CGTTCCCGGA ACGCAGCCGA CATCGGTGGC GCCGCTGCCG CCCCCCGTGA CGATCCGCTG A
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Protein sequence | MMNNRILTLL ATVAAISAGT SVVHAQNYPS APGSYVTPAP GDYRQEMPNF DNVDDEDGIG SSAALPPPGL VTSPDDPRYG RPSSAPVYSD RAPVPQGPVM SPDDPRYGRP MGAPPVYSER APVPQGPVMS PDDPRYGRPA GPPSVIYSNR GDGSLRPPEG VAGAGQPGVP QVATGSVPAA PQIGADGRPL QVAALPPEEQ PDADQEFQLP QHLRRQEVAF PTKEPAGTIV VDTGNTYLYY ILGNGRAMRY GVRVGRDGFT WNGVQKVSRK AEWPDWHPPT EMIERQPYLP RFMAGGPGNP MGARAMYLGS TVYRIHGTNQ PSTIGKFVSS GCIGMLNDDV SDLFERVKVG TRVVVLPGGA PPTPTASAQS PQPVASAQPP QQSLQMSVPG TQPTSVAPLP PPVTIR
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