| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1889 |
|---|
| Symbol | |
|---|
| ID | 3908084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 2161756 |
|---|
| End bp | 2162502 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637883783 |
|---|
| Product | 6-phosphogluconolactonase |
|---|
| Protein accession | YP_485508 |
|---|
| Protein GI | 86749012 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase |
|---|
| TIGRFAM ID | [TIGR01198] 6-phosphogluconolactonase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.140296 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTCG GCGATCATCG CCAGATCGTC ACCGCTGCCG ATGCCGAAGC GCTGGCGCGG
GTCGCGGCGC AGCGGCTGAT CGCCCGCATC GCGCTGCATC ACGAGCGCCC GGCGATCTGC
CTGACCGGCG GCTCCGGGCC GCAGCGGATG TTCGAACTGC TCGCGGGCGA ATTCGCCGAT
CGGATTCCAT GGCCGCGCGT GCACTGGTTC ATCAGCGACG AACGCTTCGT GCCGTTCGAT
AGCCCGCTAA GCAACATGGG CGCGATCAAG CGCGTGCTGC TCGACGGCCG CGCGCCGCCG
CAGAACATCC ACGCCATTCC GGCGCACGAC AGCGCCACCC CGGACGAGGC CGCGCAGCGC
TACGCGCGCG ACTTGCAGGC GTTCTACGGC GCGGCAACGC TGGATCCCAA GCGGCCGCTG
TTCGATCTGG TGCTCGGCGG CGTCGGCCCG GACGGCCACA CCGCGTCGCT GTTTCCCGGC
TGGCCGCAGC TCGAGGTGAC CGATCGCTGG GCCGCTGGGG TCGACACGGC GCATGTCGCG
CCGTTCGTGC CGCGCGTCAC CCTCACCTTT CCGGCGCTGG CGTCGTGTAG CGAGATGCTG
TTCCTCGTCC ACGGCGCGGC CAAGCGGGAG ATCGTCGGCC GCATCTTCGC GGGCGCCGAT
CTGCCGGCCA GCCGCGCCCG ATCCAACGGC GAGACGGTGT GGCTGATCAC CGAGGACGCG
CTGCCGGAGA CCGTTCGTGA GCGCTGA
|
|---|
| Protein sequence | MKVGDHRQIV TAADAEALAR VAAQRLIARI ALHHERPAIC LTGGSGPQRM FELLAGEFAD
RIPWPRVHWF ISDERFVPFD SPLSNMGAIK RVLLDGRAPP QNIHAIPAHD SATPDEAAQR
YARDLQAFYG AATLDPKRPL FDLVLGGVGP DGHTASLFPG WPQLEVTDRW AAGVDTAHVA
PFVPRVTLTF PALASCSEML FLVHGAAKRE IVGRIFAGAD LPASRARSNG ETVWLITEDA
LPETVRER
|
|---|
| |