| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1851 |
|---|
| Symbol | |
|---|
| ID | 3909010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 2116840 |
|---|
| End bp | 2117364 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637883745 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_485470 |
|---|
| Protein GI | 86748974 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.65357 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000510248 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGAGGCGTC AAACAGCAAC AGGCGGGAGC AATCCCGTCG GGTCGAGCCG CGCTCTGCGG
CTCGACCCCC TCTCACTGCC GATCCGCTTC GACGCGCACG ACGTGCGTGC CGACGGCGGC
ATCCGGCAAA TCGAATTGCA TCGCGAACGC GTGATCCTGC ACCGCGCCGT GGCCGGCATG
CGGATGGCGA TCAAGGTGCG CGTCAGCGAC TTCCGCGGCA TCGCCTGCCG CGGTCTCGAC
GACGGCCGGA TGCTGATGCT GGTGCATCGC GATCCGTCGC TGTCGGTGCC GCTGTGTATC
AGCGACGACA ACGACGAGAT CGAACGCGCC CGCGCGCTGT GGAGCGAGAT CTTCGCGCTG
CCGCAACTAC CCGACGACAC GCCGCGCGAC CCCGCGCAGC GTCGCCGCCG CCACAGCGTG
ATCAGCCGTC GCCGGCCGCG CTTCCTGATG CGCCGGCGCA CCGGGGCGCT GCTCGACGCG
CCGCGCAACT ACGCCGGCGA GCGCGAAATC ATCGCCCGCA ACTGA
|
|---|
| Protein sequence | MRRQTATGGS NPVGSSRALR LDPLSLPIRF DAHDVRADGG IRQIELHRER VILHRAVAGM
RMAIKVRVSD FRGIACRGLD DGRMLMLVHR DPSLSVPLCI SDDNDEIERA RALWSEIFAL
PQLPDDTPRD PAQRRRRHSV ISRRRPRFLM RRRTGALLDA PRNYAGEREI IARN
|
|---|
| |