Gene RPB_1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1825 
Symbol 
ID3908984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2087399 
End bp2087716 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content68% 
IMG OID637883719 
Productbranched chain amino acid ABC transporter 
Protein accessionYP_485444 
Protein GI86748948 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0791609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.220841 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG TCTTGCGCAG CGACGTGATG ATGGCGTTCG CCGTGATGAC GGCGGTCACG 
GTCGCTTCCC GGCTCGGTGG CTTCTGGCTG ATGCGCTATG TCGACGTCAC GCCGCGGGTG
CGGCGGATGC TCGACGCGCT GCCCGGTTCG ATCATCGTCG CGGCCGCGCT GCCGGTCGCG
GTCAATGGTG GGCCGATCGT GATGTTCGCG CTCGCCGCTG CGATGGCGGT CAGCATTGTC
CGCCGCAACG ACTTCATCGC GGTGATCACC GGTATGACCG TAGCGGCTTT AGCGCGGGCG
CTCGGGTTGG GCGGCTAG
 
Protein sequence
MSEVLRSDVM MAFAVMTAVT VASRLGGFWL MRYVDVTPRV RRMLDALPGS IIVAAALPVA 
VNGGPIVMFA LAAAMAVSIV RRNDFIAVIT GMTVAALARA LGLGG