| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1782 |
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| Symbol | |
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| ID | 3908863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2043764 |
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| End bp | 2045041 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883676 |
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| Product | pilus assembly protein cpaE |
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| Protein accession | YP_485401 |
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| Protein GI | 86748905 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.216369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.120682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGCT ACGGACGCCA GAACCAGGAC GAGCCCGCGG ACGGCGCGCC GATCGGCGCC
GCCACGCCGG ACGAGCACAT CGCGCCGGCG CCCCGGGTCT CGGTCCAGGC CTTCTGCGAG
TCGGTCGACA CCGCCGCGGC GGTGCAGTCC GCCGGCGAGG ACCGCCGCCT CGCCAAGGCG
CATCTGAAGA TCCAGATGGG CGGCATGGTC GCGGCGATCG AGGCGTATCG CTCGGCCCCG
ACCCCCAACG TCATCATCCT GGAGACCGAC CCGCGCAGCG ACATTCTCGC CGGCCTCGAC
CAACTCGCCA CCGTGTGCGA TCCCGGCACC CGCGTCATCG TGATCGGCAA GGTCAACGAC
GTCACGCTGT ATCGCGAACT GGTGCGCCGC GGCGTCAGCG ACTACGCGAT CGCGCCGGTG
TCGCCGATCG ACATCGTGCG CTCGATCTGC AACCTGTTTT CCGCGCCGGA AGCCAAGGCG
GTCGGCCGCA TCATCGCGGT GGTCGGCGCC AAGGGCGGCG TCGGCGCCTC GACCATCGCG
CACAACATCG CCTGGGCGAT CGCGCGCGAT CTGGCGCTGG ATTCGGTGGT GGCCGATCTC
GATCTCGCGT TCGGCACCGC CGGCCTCGAC TACAACCAGG ACCCGCCGCA GGGCATCGCC
GAGGCGGTGT TCTCGCCGGA CCGCGTCGAC ACCGCCTTCG TCGACCGCCT GCTGTCGAAA
TGCACCGACC ATCTCAGCCT GCTGGCGGCG CCGGCGACGC TCGACCGGGT CTATGATTTC
GGCACCGAAG CGTTCGATAC GATCTTCGAT ACGCTGCGCT CGACGATGCC CTGCATCGTG
CTCGACGTGC CGCATCAATG GACCGGCTGG ACCAAGCGGG CGCTGATCAA CGCCGACGAC
ATCCTGATCG TCGCGACGCC GGACCTCGCC AACCTGCGCA ACACCAAGAA CCTGTACGAT
CTGCTGAAGG CGGCGCGCCC GAACGACCGG CCGCCGCTGT ACTGCCTGAA CCAGGTCGGC
GTGCCGAAGC GGCCGGAGAT CAATTCCGGC GAATTCGCCA AGGCGATCGA GAGCCCGCCG
ATCGTCAGCA TCCCGTTCGA CCCGCAGATG TTCGGCGCCG CCGCCAACAA CGGCCAGATG
ATCGCCGAGA TCGCGGCGAG CCACAAGACC ACGGAGATGT TCCTGCAGAT CGCCCAGCGG
CTGACGGGAC GCGGCGAAGC CAAGAAGCCG AAAGGCGGAT TCCTGTCGCC GATCCTGGAG
AAGCTGCGGG CGAAATAA
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| Protein sequence | MISYGRQNQD EPADGAPIGA ATPDEHIAPA PRVSVQAFCE SVDTAAAVQS AGEDRRLAKA
HLKIQMGGMV AAIEAYRSAP TPNVIILETD PRSDILAGLD QLATVCDPGT RVIVIGKVND
VTLYRELVRR GVSDYAIAPV SPIDIVRSIC NLFSAPEAKA VGRIIAVVGA KGGVGASTIA
HNIAWAIARD LALDSVVADL DLAFGTAGLD YNQDPPQGIA EAVFSPDRVD TAFVDRLLSK
CTDHLSLLAA PATLDRVYDF GTEAFDTIFD TLRSTMPCIV LDVPHQWTGW TKRALINADD
ILIVATPDLA NLRNTKNLYD LLKAARPNDR PPLYCLNQVG VPKRPEINSG EFAKAIESPP
IVSIPFDPQM FGAAANNGQM IAEIAASHKT TEMFLQIAQR LTGRGEAKKP KGGFLSPILE
KLRAK
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