Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1765 |
Symbol | |
ID | 3909752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 2022730 |
End bp | 2023617 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637883659 |
Product | 5,10-methylenetetrahydrofolate reductase |
Protein accession | YP_485384 |
Protein GI | 86748888 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.294804 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0134903 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG TGCTGCAGCA CATTCCGGCG ATCTCCTTCG AGTTCTTCCC GCCGAAGACC GACGAGATGG AGCGCAATCT GTGGCAGGCG ATCAGCCGGC TGGCGCCGCT GCATCCGCGC TTCGTCTCGG TGACTTACGG CGCCGGCGGC TCGACCCGCG AGCGCACCCA TTCGACCATC GCCCGCATCC TGCGCGAGAC CAGCCTGACG CCGGCCGCCC ACCTCACCTG CGTCGATGCG CCCTGCGCCG ATGTCGACGA CGTGGTCGAG CGCTATCACG AGATCGGCGT CCGCCATATC GTGGCGCTGC GCGGCGATCC CACCAGCGGC CTCGGCGGCG CCTACACCCC GCATCCGCAG GGTTATCGCA GTTCGGCCGA TCTGGTCGCA TCGATCAAGC GCAAGCATCC GGACATCGAC GTCACCGTGT CGGCCTATCC GGAGAAACAT CCGGAGAGCG CGAGCTTCGA CGCCGATCTC GACATGCTGC AGGCCAAGGT CGATGCCGGG GCGACCCGCG CCATCACCCA GTTCTTCTTC GACAATGATC TGTACTTCCG CTACCTCGAC CGCGTCCGCG CCCGCGGCAT CGACATTCCG ATCGTGCCCG GCATCCTGCC GGTGCAGAAC TTCAAGCAGG CGTCGAGCTT CGCCACGCGC GCCGGCGCCA CCGTGCCGGA CTGGCTGGCG AAGCAGTTCG AAGGCCTCGA CGACGATCCC GACACCCGCA AGCTGGTGGC GGCGACGATG GCGGCAGGCC AGGTGCACAA GCTCGCCAAG CACGGCGTCG ACACCTTCCA CTTCTACACC ATGAACCGCG CGGACCTGGT GTTCGCGATC AGCCACCTGC TCGGCCTTCG GCCGCAGGCG GCGCAGAAAG CCGCATGA
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Protein sequence | MTDVLQHIPA ISFEFFPPKT DEMERNLWQA ISRLAPLHPR FVSVTYGAGG STRERTHSTI ARILRETSLT PAAHLTCVDA PCADVDDVVE RYHEIGVRHI VALRGDPTSG LGGAYTPHPQ GYRSSADLVA SIKRKHPDID VTVSAYPEKH PESASFDADL DMLQAKVDAG ATRAITQFFF DNDLYFRYLD RVRARGIDIP IVPGILPVQN FKQASSFATR AGATVPDWLA KQFEGLDDDP DTRKLVAATM AAGQVHKLAK HGVDTFHFYT MNRADLVFAI SHLLGLRPQA AQKAA
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