| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1749 |
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| Symbol | |
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| ID | 3909736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1998993 |
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| End bp | 2000183 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637883643 |
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| Product | Acyl-CoA dehydrogenase-like |
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| Protein accession | YP_485368 |
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| Protein GI | 86748872 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | [TIGR03204] pimeloyl-CoA dehydrogenase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0172136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGA ACTTCAGCAA GGAAGAAATC GCGTTTCGCG ACGAGGTGCG GCAGTTCTTC
AAGGACAACG TGCCGGCGAA GACGCGGCAG AAGCTGGTCG AGGGCCGGCA TCCGTCGAAG
GACGACATGG TGGAGTGGTA TCGCATCCTC CACAAGAAGG GCTGGGGCGT CACCCACTGG
CCGAAGGAAT ATGGCGGCAC CGGTTGGAGC AGCGTGCAGC ACTACATCTT CAACGAGGAG
CTGCAGGCCG CCCCCGCGCC GCAGCCGCTC GCTTTCGGCG TGTCGATGGT GGGACCTGTG
ATCTACACTT TCGGCAGTGA AGAGCAGAAG AAGCGCTTCC TGCCGCGCAT CGCCAGCGTC
GAGGATTGGT GGTGCCAGGG CTTCTCCGAG CCCGGCTCCG GCTCCGATCT CGCCTCGCTC
AAGACCAAGG CCGAGAAGCG CGGCGACAAG TGGATCATCA ACGGCCAGAA GACCTGGACC
ACGCTGGCGC AATACGCCGA CTGGATCTTC TGCCTGTGCC GCACCGACCC CGCCGCCAAG
AAGCAGTCGG GCATTTCCTT CATCCTGGTC GACATGAAGA CCAAGGGCAT CACGGTGCGC
CCGATCCAGA CCATCGACGG CGGCAAGGAA GTCAACGAAG TGTTCTTCGA CGACGTCGAG
GTGCCGCTCG AAAATCTGGT CGGCGAGGAG AACAAGGGCT GGGACTACGC CAAATTCCTG
CTCGGCAACG AGCGCACCGG CATTGCCCGG GTCGGCATGT CGAAGGAGCG CATCCGCCGC
ATCAAGGAAC TGGCCGCCTC GGTCGAATCC GGCGGCAAGC CGGTGATCGA GAACCCCAAG
TTCCGCGACA AGCTCGCCGC GGTCGAGATC GAGCTGAAGG CGCTCGAACT GACGCAGCTC
CGCGTCGTCG CCGATGAAGG CAAGCACGGC AAGGGCAAGC CGAACCCGGC GTCGTCGGTG
CTGAAGATCA AGGGCTCCGA GATCCAGCAG GCGACCACCG AGCTGTTGAT GGAAGTGATC
GGCCCGTTCG CCGCGCCCTA CGATGTGCAC GGCGACGACG ACAGCAACGA GACGATGGAC
TGGACCGCGC AGATCGCGCC GAGCTACTTC AACAACCGCA AGGTGTCGAT CTACGGCGGC
TCGAACGAGA TCCAGCGCAA CATCATCACC AAGGCGGTGC TCGGGCTGTA A
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| Protein sequence | MDLNFSKEEI AFRDEVRQFF KDNVPAKTRQ KLVEGRHPSK DDMVEWYRIL HKKGWGVTHW
PKEYGGTGWS SVQHYIFNEE LQAAPAPQPL AFGVSMVGPV IYTFGSEEQK KRFLPRIASV
EDWWCQGFSE PGSGSDLASL KTKAEKRGDK WIINGQKTWT TLAQYADWIF CLCRTDPAAK
KQSGISFILV DMKTKGITVR PIQTIDGGKE VNEVFFDDVE VPLENLVGEE NKGWDYAKFL
LGNERTGIAR VGMSKERIRR IKELAASVES GGKPVIENPK FRDKLAAVEI ELKALELTQL
RVVADEGKHG KGKPNPASSV LKIKGSEIQQ ATTELLMEVI GPFAAPYDVH GDDDSNETMD
WTAQIAPSYF NNRKVSIYGG SNEIQRNIIT KAVLGL
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