Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1744 |
Symbol | |
ID | 3909731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1991715 |
End bp | 1992512 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637883638 |
Product | ABC transporter related |
Protein accession | YP_485363 |
Protein GI | 86748867 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0853683 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCAGG CACATTCGGG ACAAACCGCG TCACCGCTGC TCGCGGTGCG CGACGTCAGC GTCGTGTTCG GCGGCATCGT CGCCTTGAAC GGCATTTCAT TCGACATGAA GAAGGGCCAG ATCCTCGGAC TGATCGGCCC GAACGGCGCC GGCAAGACCA CGCTGTTCAA CTGCCTGTCG CGGCTGTATC AGCCGAGCAA GGGTGACATC CTGCTCGAAG GCGACAGCAT CCTCACCCGT CCGCCGCACC GCATCGCGGA AGTCGGCATC GGCCGCACGT TCCAGAACGT CGCGCTGTTC CCGAATCTGA CTGTGCTGGA CAACGTCCGC GTCGGCACGC ATTCGCGTAC CAACAGCGAC ATCGTCTCGG ACTCGCTGCG CCTGCCCTGG ATCCGCAACG GTGAAAAGGC GATGAACAAG CGCGTCCACG CCATCCTCGA CTATCTCGAG CTGGGCAGCG TCGCGCACAC CGTGGTGTCG GGCCTGCCGT TCGGCACGCA GAAGCGCGTC GAGTTGGCGC GCGCGCTCGC CGCCGAGCCG AAGATCCTGC TGCTCGACGA GCCGGCCGGT GGCCTCAATC ACGAGGAGGT CTACATCCTC GGCGACCTGA TCCGGAAGAT CCGCGACGAC CGCGGCATCA CCGTGCTGCT GGTCGAACAC CACATGGGTC TGGTGATGTC GATCGCCGAC CACGTCGTCG CGCTGAATTT CGGCCGCAAG CTCGCAGAGG GAACGCCCAC GCAGGTGCAG AACGACCCGG ATGTGATCAA GGCCTATCTG GGGAGCAAGG ACCAATGA
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Protein sequence | MMQAHSGQTA SPLLAVRDVS VVFGGIVALN GISFDMKKGQ ILGLIGPNGA GKTTLFNCLS RLYQPSKGDI LLEGDSILTR PPHRIAEVGI GRTFQNVALF PNLTVLDNVR VGTHSRTNSD IVSDSLRLPW IRNGEKAMNK RVHAILDYLE LGSVAHTVVS GLPFGTQKRV ELARALAAEP KILLLDEPAG GLNHEEVYIL GDLIRKIRDD RGITVLLVEH HMGLVMSIAD HVVALNFGRK LAEGTPTQVQ NDPDVIKAYL GSKDQ
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