Gene RPB_1744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1744 
Symbol 
ID3909731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1991715 
End bp1992512 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content64% 
IMG OID637883638 
ProductABC transporter related 
Protein accessionYP_485363 
Protein GI86748867 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0853683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAGG CACATTCGGG ACAAACCGCG TCACCGCTGC TCGCGGTGCG CGACGTCAGC 
GTCGTGTTCG GCGGCATCGT CGCCTTGAAC GGCATTTCAT TCGACATGAA GAAGGGCCAG
ATCCTCGGAC TGATCGGCCC GAACGGCGCC GGCAAGACCA CGCTGTTCAA CTGCCTGTCG
CGGCTGTATC AGCCGAGCAA GGGTGACATC CTGCTCGAAG GCGACAGCAT CCTCACCCGT
CCGCCGCACC GCATCGCGGA AGTCGGCATC GGCCGCACGT TCCAGAACGT CGCGCTGTTC
CCGAATCTGA CTGTGCTGGA CAACGTCCGC GTCGGCACGC ATTCGCGTAC CAACAGCGAC
ATCGTCTCGG ACTCGCTGCG CCTGCCCTGG ATCCGCAACG GTGAAAAGGC GATGAACAAG
CGCGTCCACG CCATCCTCGA CTATCTCGAG CTGGGCAGCG TCGCGCACAC CGTGGTGTCG
GGCCTGCCGT TCGGCACGCA GAAGCGCGTC GAGTTGGCGC GCGCGCTCGC CGCCGAGCCG
AAGATCCTGC TGCTCGACGA GCCGGCCGGT GGCCTCAATC ACGAGGAGGT CTACATCCTC
GGCGACCTGA TCCGGAAGAT CCGCGACGAC CGCGGCATCA CCGTGCTGCT GGTCGAACAC
CACATGGGTC TGGTGATGTC GATCGCCGAC CACGTCGTCG CGCTGAATTT CGGCCGCAAG
CTCGCAGAGG GAACGCCCAC GCAGGTGCAG AACGACCCGG ATGTGATCAA GGCCTATCTG
GGGAGCAAGG ACCAATGA
 
Protein sequence
MMQAHSGQTA SPLLAVRDVS VVFGGIVALN GISFDMKKGQ ILGLIGPNGA GKTTLFNCLS 
RLYQPSKGDI LLEGDSILTR PPHRIAEVGI GRTFQNVALF PNLTVLDNVR VGTHSRTNSD
IVSDSLRLPW IRNGEKAMNK RVHAILDYLE LGSVAHTVVS GLPFGTQKRV ELARALAAEP
KILLLDEPAG GLNHEEVYIL GDLIRKIRDD RGITVLLVEH HMGLVMSIAD HVVALNFGRK
LAEGTPTQVQ NDPDVIKAYL GSKDQ