Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1738 |
Symbol | |
ID | 3909725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1984681 |
End bp | 1985910 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637883632 |
Product | leucine/isoleucine/valine-binding protein precursor |
Protein accession | YP_485357 |
Protein GI | 86748861 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0827731 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTTCAC TCCGTTCGCA CGCGGCTGCC ATCTCGGCTG CGCTCGCGGT GACACTCGCA GCCTCGAGCG GCGCGCTCGC GCAGAAGAAA TACGATTCCG GCGCAAGCGA CACCGAGATC AAGATCGGCA ACATCATGCC CTACAGCGGA CCCGCCTCCG CTTACGGCGT GATCGGCAGA ACCGAAGCCG CGTACTTCAA GATGATCAAC GACAAGGGCG GCATCAACGG CCGCAAGATC AACTTCATCA CCTACGACGA CGCCTATTCG CCGCCGAAGA CCGTGGAGCA GGCACGCAAG CTGGTCGAGA GCGACGAGGT GCTGCTGATC TTCAACTCGC TCGGCACGCC GCCGAACTCG GCGATCCACA AATACATGAA CAGCAAGAAG GTGCCGCAGC TGTTCGTCGC CACCGGCGCG ACCAAGTGGA ACGATCCCAA GGACTTCCCC TGGACGATGG GCTGGCAGCC CAACTACCAG AGCGAGACCC AGATCTACGC CAAGTACATC ATGAAGGAGA TGCCGACCGC CAAGATCGCG GTGCTGTATC AGAACGACGA TTACGGCAAG GACTATCTGA AGGGCCTGGA GGACGGGCTC GGCGCCAAGG GCGCGTCGAT GATCGTCATG AAGGAGAGCT ACGAGATCTC CTCGCCGACG ATCGACAACC AGATCGTCAA GCTGAAGTCG AGCGGCGCCG ACGTCTTCAT CAACATCACC ACGCCGAAAT TCGCCGCCCA GGCGATCAAG AAGTTGAATG AAGTCGGTTG GAAGCCGACC CACTTCCTGA ACAACGTCTC GGCCTCGGTC GGCAGCGTGA TCAAGCCCGC CGGCTACGAG AACGCGCAGG GCATCATCTC CGCCGCCTAC ATGAAGGACG TCTCCGACAC GCAGTGGAAG GACGACCCGG GCATGAAGGA GTTCCTGGCC TTCATGGACA AGGAATTTCC GGAAGGCAAC AAGCTCGATG GCGGCACCAT CGTCGGCTAC GGCGTGGCGC AGACGCTCGT CGAAGTGCTG AAGAAGAGCG GCGACGATCT GACCCGCGCC AACGTGATGA AGCAGGCCGC GAGCCTGAAG GACTTCCGCA CCGAGGTGCT GCTTCCCGGG ATCAAGATCA ACACCTCGGC GACCGACTTC GCGCCGATCA GCCAGTTGCA GCTGATGCGC TTCAAGGGCG AGAAGTGGGA GCTGTTCGGC GACGTGATCA GCGCCGACGT CGGCGGCTGA
|
Protein sequence | MPSLRSHAAA ISAALAVTLA ASSGALAQKK YDSGASDTEI KIGNIMPYSG PASAYGVIGR TEAAYFKMIN DKGGINGRKI NFITYDDAYS PPKTVEQARK LVESDEVLLI FNSLGTPPNS AIHKYMNSKK VPQLFVATGA TKWNDPKDFP WTMGWQPNYQ SETQIYAKYI MKEMPTAKIA VLYQNDDYGK DYLKGLEDGL GAKGASMIVM KESYEISSPT IDNQIVKLKS SGADVFINIT TPKFAAQAIK KLNEVGWKPT HFLNNVSASV GSVIKPAGYE NAQGIISAAY MKDVSDTQWK DDPGMKEFLA FMDKEFPEGN KLDGGTIVGY GVAQTLVEVL KKSGDDLTRA NVMKQAASLK DFRTEVLLPG IKINTSATDF APISQLQLMR FKGEKWELFG DVISADVGG
|
| |