Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1731 |
Symbol | |
ID | 3908256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1975885 |
End bp | 1977276 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637883625 |
Product | aminotransferase class-III |
Protein accession | YP_485350 |
Protein GI | 86748854 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0385469 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATATC CCCATATCGA CGTCGCCGCG CTCTTCGCCG ACCGCGAGTC CGAGCGGAGC GCAATGCATA CGCGCAACCT CAACGAGCAG CTCGTGCGCG TGCTCAAGAC GATCGGCTAC GATGTCGGGT TCCAGAAGGG AAGCGGGCAG TATCTTTACG ATCGGGACGG TGCCCGTTAT CTCGATCTGC TCAGTGGCTT CGGCGTTTTC GCGCTCGGCC GCAATCATCC GGCGCTGCGC GACGCGCTGA AGAGCGTGCT CGACGGCGAA CTGCCGAACC TGGTGCAGCT CGACGTCTCG ACCTTGGCCG GCGTGCTCGC CGAGCGCCTG TTGGAGCTCG TGCCCTATCT CGACAAGGTC TTCTTCGCCA ATTCCGGAGC CGAGAGCGTC GAGGCTGCGA TCAAATTCGC CCGCAACGCC ACCGGGCGCC AGGGCATCGT CAACTGCGAC CACAGCTATC ACGGCCTGAC CTATGGCGCG CTGTCGCTGA CCGACGACCA GAATTTTCAG GGCGGCTTCG GGCCGCTGTT GCCCGGCGTT ACCACGATCC CGTTCAACGA TCTCGAAGCA CTGGAGAAGG CGCTGTCGAC CCGCGAGGTC GCGGCCTTCA TCGTCGAGCC GATCCAGGGC AAGGGCGTCA ACATGCCCAG CGACGAGTTC CTGCCGGGTG CGGCGGCGCT GTGCAAGCGC TACGGCACGC TGTTCGTCGC CGACGAGATC CAGACCGGCA TGGGCCGCAC CGGCCGCTTC CTCGCGGTCG AGCACTGGAA CGTTGAGCCC GACATGGTGC TGTTGTCGAA GGCACTGAGC GGCGGCCATG TCCCGGTCGG CGCGGTGCTG ACGCGCAGGG CGATCTTCGA CAAGATCTTC AACCGGATGG ATCGCGCCGT GGTGCACGGC TCGACCTTCG CCAAGAACGA TCTGGCGATG GCCGCCGGCA TCGCTACGCT CGACGTGATG AAGCACGAGA AGCTGATCGA GGCCGCCGCC AAGCGCGGCG CCGAGCTGCG GCTGGCGCTC AGCGGCATGA TCCCGGGCTA CGAACTTCTC AAAGACGTCC GCGGCAAGGG GCTGATGATC GGCGTCGAAT TCGGCCCGCC GAAATCAATG CGGCTGAAGG CGTCGTGGGC CATGCTGGAG ACCGCCAACA AGGGTCTGTT CGTTCAGCTG ATCACCGTGC CGCTGTTCAA GGATCACAAG ATCCTGACGC AGGTCGCGGG CCACGGTTTG CACACCATCA AGCTGCTGCC GCCGCTGACG ATCACCGAGG ACGACTGCAA GTGGATCGTG CGCGGCTTCG ACGAAGCGAT CGCCGCCAGC CACAAGGTCC CCGGCGCGAT CTGGTCGCTC GGCAAGACCT TGGTCGACAA CGCGGTGCGC AAGTCGGCGT GA
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Protein sequence | MPYPHIDVAA LFADRESERS AMHTRNLNEQ LVRVLKTIGY DVGFQKGSGQ YLYDRDGARY LDLLSGFGVF ALGRNHPALR DALKSVLDGE LPNLVQLDVS TLAGVLAERL LELVPYLDKV FFANSGAESV EAAIKFARNA TGRQGIVNCD HSYHGLTYGA LSLTDDQNFQ GGFGPLLPGV TTIPFNDLEA LEKALSTREV AAFIVEPIQG KGVNMPSDEF LPGAAALCKR YGTLFVADEI QTGMGRTGRF LAVEHWNVEP DMVLLSKALS GGHVPVGAVL TRRAIFDKIF NRMDRAVVHG STFAKNDLAM AAGIATLDVM KHEKLIEAAA KRGAELRLAL SGMIPGYELL KDVRGKGLMI GVEFGPPKSM RLKASWAMLE TANKGLFVQL ITVPLFKDHK ILTQVAGHGL HTIKLLPPLT ITEDDCKWIV RGFDEAIAAS HKVPGAIWSL GKTLVDNAVR KSA
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